PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913793.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

ARR-B

Protein Properties

Length: 483aa MW: 54224.3 Da PI: 4.3625

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913793.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.7	1.2e-23	207	260	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kp+l Wt+eLH+rF++a++ L G+++A Pk+il+ m+ +gL e++ SHLQkYRl XP_023913793.1 207 KPKLTWTNELHDRFLQAIKVL-GIDRAHPKKILKYMNTPGLKKENISSHLQKYRL 260 79*****************.******************************8 PP
2	Myb_DNA-binding	37.2	6.9e-12	209	259	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 ++ WT e+++++++a+k lG + ++k+I ++m+ g+ +++ s++qky+ XP_023913793.1 209 KLTWTNELHDRFLQAIKVLGIDraHPKKILKYMNtPGLKKENISSHLQKYR 259 689***********************************************7 PP
3	Response_reg	50.8	9.2e-18	24	130	1	108
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 +l+vd +p+ + ++ ++l + gy +v +++ +++al++++e+d +l+l +p+md +e+l+++ e + klp+++++a ++e+++l l Ga XP_023913793.1 24 ILVVDCDPTCLTIISEMLCRFGY-KVVTTKRASDALAIAREEDdLQLVLAEAHLPDMDKYEFLERMGEMS-KLPVVIMSADDNENTVLGSLFKGA 116 89*******************.***********88888******************9988.9******************* PP SEEEESS--HHHHH CS Response_reg 95 kdflsKpfdpeelv 108 +l Kp+ +++ XP_023913793.1 117 ALYLIKPITLNDMK 130 ******999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MNSEKSISIE SIRNSSSLPK GVSILVVDCD PTCLTIISEM LCRFGYKVVT TKRASDALAI 60 AREEDDLQLV LAEAHLPDMD KYEFLERMGE MSKLPVVIMS ADDNENTVLG SLFKGAALYL 120 IKPITLNDMK NLWQFAFMKN GEKTLVADGV SSVQGESSDE SASDEDTESQ SFENRRKQSL 180 QKAKRIALEE TEKDEEEENY DSSILKKPKL TWTNELHDRF LQAIKVLGID RAHPKKILKY 240 MNTPGLKKEN ISSHLQKYRL SLKQEQDAIQ KTMIRDPTGS SLTSYYPSST FNLQEFLQVS 300 NQQSSATSNQ PELGNDVQRN LSSQMHMPFR GSADFPNYID SSCSDPSNPT NGQLTPPVNQ 360 LDSTYPDSSY VGSWITSNEL AGFFQIGNSS GEETLSGNMD PFGVDHIGFL SDTTQQEQLQ 420 QPYQPLPPPP QPPQEPENHD IFGVERGEID ELFDLLKDPN NMFNDEDLDD LWQSTSFVSR 480 HQG

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MNSEKSISIE SIRNSSSLPK GVSILVVDCD PTCLTIISEM LCRFGYKVVT TKRASDALAI  60
AREEDDLQLV LAEAHLPDMD KYEFLERMGE MSKLPVVIMS ADDNENTVLG SLFKGAALYL  120
IKPITLNDMK NLWQFAFMKN GEKTLVADGV SSVQGESSDE SASDEDTESQ SFENRRKQSL  180
QKAKRIALEE TEKDEEEENY DSSILKKPKL TWTNELHDRF LQAIKVLGID RAHPKKILKY  240
MNTPGLKKEN ISSHLQKYRL SLKQEQDAIQ KTMIRDPTGS SLTSYYPSST FNLQEFLQVS  300
NQQSSATSNQ PELGNDVQRN LSSQMHMPFR GSADFPNYID SSCSDPSNPT NGQLTPPVNQ  360
LDSTYPDSSY VGSWITSNEL AGFFQIGNSS GEETLSGNMD PFGVDHIGFL SDTTQQEQLQ  420
QPYQPLPPPP QPPQEPENHD IFGVERGEID ELFDLLKDPN NMFNDEDLDD LWQSTSFVSR  480
HQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-48	ARR-B family protein