PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023913790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ARR-B | ||||||||
Protein Properties | Length: 586aa MW: 65979 Da PI: 7.1338 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 49.4 | 9.8e-16 | 201 | 252 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 kp l+W++eLH+rF +a + L G++ + Pk+i ++m+ +gL +e++ SHLQ+Y XP_023913790.1 201 KPNLVWNNELHNRFPQAFNVL-GID-THPKKIIQHMNAPGLKRENISSHLQRYH 252 6899*****************.888.79*************************7 PP | |||||||
2 | Myb_DNA-binding | 22.4 | 2.9e-07 | 205 | 251 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqky 47 W e++ ++ +a++ lG + ++k+I ++m+ g+ ++++ s++q y XP_023913790.1 205 VWNNELHNRFPQAFNVLGIDtHPKKIIQHMNaPGLKRENISSHLQRY 251 7********************************************98 PP | |||||||
3 | Response_reg | 57 | 1.1e-19 | 24 | 130 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 +l+vd + + + ++ ++l + gy +v +a++g++al++++ekd +l+l+ +p+md +e+l+++re + klp+i+++a ++e+ +l l Ga XP_023913790.1 24 ILVVDGDSTCLTIISKMLYRFGY-KVVTAKQGSDALAIAREKDdLQLVLTEAHLPDMDKYEFLERMREMS-KLPVIIMSADDSEKAMLGSLFKGA 116 89*********************.***************98888************************99.************************ PP SEEEESS--HHHHH CS Response_reg 95 kdflsKpfdpeelv 108 +l+Kp+ +++ XP_023913790.1 117 VLHLVKPITLNDMK 130 ********999886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 586 aa Download sequence |
MNREKSISVE PIRNSSSLPR DVSILVVDGD STCLTIISKM LYRFGYKVVT AKQGSDALAI 60 AREKDDLQLV LTEAHLPDMD KYEFLERMRE MSKLPVIIMS ADDSEKAMLG SLFKGAVLHL 120 VKPITLNDMK NLWQFALMKK SDKTLAAARI SSGQWALSEE SVNQPFENKK EESHQKAKRK 180 APEETNKDEE EENYDSSVLK KPNLVWNNEL HNRFPQAFNV LGIDTHPKKI IQHMNAPGLK 240 RENISSHLQR YHLPLKCQQD AIQKTMIGES TGSSLGPYYP SSSVSLHGLH QFSNQQSVST 300 SYQPEFGNDL RRNLSSHMYT PFLGSAHFPN YVNSSLGSHY PSPAFNLHGL LQFPNQYAAS 360 TSYQPEFGND LRRNLSSHMY MPFLGSAHFP NYVDSGLGSY YPSSAFNLHG LQFSNQQSAS 420 TSYQPVLGNG LQRNLSGHIY MPFVGSAHVP NYIDSSCSNP SNPMYGQLTP PVSQLGYTFP 480 NSSHVGSWII SNELAGFVQI GNSSGEETVS RNTDPFGVHN IGFLSDNTQQ EHLQQQQQFL 540 QQQQPFLQQQ QPFLQQQPFL RQQQQPFLQQ PYQPLPPPPQ PPQEPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-47 | ARR-B family protein |