PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023913619.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 254aa MW: 29351.9 Da PI: 8.8357 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 81.2 | 2.2e-25 | 58 | 195 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy..kvePwdLpk.......kvkaeek..ewyfFskrdkkyatgkrknratksgyWk. 84 p G+rF Ptdeelv +yL +kv g +++++ i+e d+y ++ePw++ + + ++++ e+ fF++ ++ ++t++r +r++ +g Wk XP_023913619.1 58 PEGYRFCPTDEELVLYYLYRKVIGATTHEDGRIPEHDLYapNTEPWKIWAafggpnlE--ENKEelELLFFTRLKRVSSTDSRIKRTIGNGCWKg 150 89************************999888*****994458*****7446777432..33332488*************************98 PP NAM 85 .atgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 a+gk +v+ + +++ +g kkt+ + + ++ + +W++he +l XP_023913619.1 151 nASGKYAKVVLEtlTRTRIGFKKTFHYKSD--ESKDNNRWILHELSL 195 889999999888788888*******99844..444699******876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 254 aa Download sequence |
IGDMVVCRLR KHPKKEEIIP RTHASSQASQ NTKLMLEFLL ELLQSNSREI TMVPTMIPEG 60 YRFCPTDEEL VLYYLYRKVI GATTHEDGRI PEHDLYAPNT EPWKIWAAFG GPNLEENKEE 120 LELLFFTRLK RVSSTDSRIK RTIGNGCWKG NASGKYAKVV LETLTRTRIG FKKTFHYKSD 180 ESKDNNRWIL HELSLDKSLL LQAKIEDLVV CRLRKHLKKE AITPDTKVSS LATNLMLDYW 240 KLDSGEILFD PPIS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65910.1 | 7e-13 | NAC family protein |