PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023913456.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21266.7 Da PI: 5.4098 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.8 | 1.1e-17 | 33 | 83 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r +r +lg+f t eAa a++ a++kl+g XP_023913456.1 33 CNYRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSIEAALAYDGAARKLYG 83 56*****999.**********8...3.35************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 194 aa Download sequence |
MENEARKVTK KPSMGRSRKG CLRGKGGPEN ALCNYRGVRQ RTWGKWVAEI REPNRGARLW 60 LGTFNTSIEA ALAYDGAARK LYGPSAKLNL PDRSSSPRSS EPEVTSLSMG NNSSSSGSCG 120 SDNGSVKEEE RTFMGDVCRE SLWEGSSVPG SIDELLVGNN FLEVNDNGDP MSGLMVEGEF 180 LDWDTLHLQF PWSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75490.1 | 9e-45 | ERF family protein |