PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913429.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 521aa MW: 57705.4 Da PI: 6.2245

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	471	518	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+ E++ l +v+++G+g+Wk+I + Rt+ ++k++w++ XP_023913429.1 471 RWSLLEEDTLRTGVQKYGKGNWKLILNSYRdifDERTEVDLKDKWRNM 518 9******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 521 aa Download sequence
MDPDICRWIS EFLMRSTAPD HVIKKVLQVL PVSGADSRFK KTVLLRTIRS EIADASVTET 60 TLQTLELIEE MDRSEGVEIR DSLKAAYCAV AVECTVKYLL GSPDKHGEYF EAVKRVWRGR 120 IGNLEKYGKT ELVTDELTRW RDDLELALWE ANTAKRLTKL NTRTEALRAL RVFLGEAWAL 180 MGPSFLESAA ALIEPSDLQN LSGDQMPANN AGGLAAATVE AAEPAAAAAV VAVVDSSNVG 240 ELGVEEEVGA THPEPTVNGE GSREMGVNDK PAGREIHKGN VLPRCKHVAW HKRSKGGVRI 300 TEEVDTDASP SKYDSLPTPE VNMIREALKS SSLELQAVVN DPLPEALHLS ETIIADMVKK 360 DKIHEPSVEN QSGKDIDALN PSVDKGVAAQ TTDSGCGNQS CIPQGNATRP SLMERNGTAH 420 TYEWEDSIDG SPGGMTNRAG RPHLPSPKRK IVSPLKKYEV TKFVRRRRLK RWSLLEEDTL 480 RTGVQKYGKG NWKLILNSYR DIFDERTEVD LKDKWRNMTR Y

Sequence ? help Back to Top

Protein Sequence Length: 521 aa Download sequence

MDPDICRWIS EFLMRSTAPD HVIKKVLQVL PVSGADSRFK KTVLLRTIRS EIADASVTET  60
TLQTLELIEE MDRSEGVEIR DSLKAAYCAV AVECTVKYLL GSPDKHGEYF EAVKRVWRGR  120
IGNLEKYGKT ELVTDELTRW RDDLELALWE ANTAKRLTKL NTRTEALRAL RVFLGEAWAL  180
MGPSFLESAA ALIEPSDLQN LSGDQMPANN AGGLAAATVE AAEPAAAAAV VAVVDSSNVG  240
ELGVEEEVGA THPEPTVNGE GSREMGVNDK PAGREIHKGN VLPRCKHVAW HKRSKGGVRI  300
TEEVDTDASP SKYDSLPTPE VNMIREALKS SSLELQAVVN DPLPEALHLS ETIIADMVKK  360
DKIHEPSVEN QSGKDIDALN PSVDKGVAAQ TTDSGCGNQS CIPQGNATRP SLMERNGTAH  420
TYEWEDSIDG SPGGMTNRAG RPHLPSPKRK IVSPLKKYEV TKFVRRRRLK RWSLLEEDTL  480
RTGVQKYGKG NWKLILNSYR DIFDERTEVD LKDKWRNMTR Y

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	448	468	KRKIVSPLKKYEVTKFVRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	8e-23	MYB_related family protein