PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913428.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 523aa MW: 57890.6 Da PI: 6.3777

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913428.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.2	1.2e-10	473	520	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+ E++ l +v+++G+g+Wk+I + Rt+ ++k++w++ XP_023913428.1 473 RWSLLEEDTLRTGVQKYGKGNWKLILNSYRdifDERTEVDLKDKWRNM 520 9******************************99*********95 PP

Sequence ? help Back to Top
Protein Sequence Length: 523 aa Download sequence
MDPDICRWIS EFLMRSTAPD HVIKKVLQVL PVSGADSRFK KTVLLRTIRS EIADASVTET 60 TLQTLELIEE MDRSEGVEIR DSLKAAYCAV AVECTVKYLL GSPDKHGEYF EAVKRVWRGR 120 IGNLEKYGKT ELVTDELTRW RDDLELALWE ANTAKRLTKL NTRTEALRAL RVFLGEAWAL 180 MGPSFLESAA ALIEPSDLQN LSGDQMPANN AGGLAAATVE AAEPAAAAAV VAVVDSSNVG 240 ELGVEEEVGA THPEPTVNGE GSREMGVNDK PAGRGKEIHK GNVLPRCKHV AWHKRSKGGV 300 RITEEVDTDA SPSKYDSLPT PEVNMIREAL KSSSLELQAV VNDPLPEALH LSETIIADMV 360 KKDKIHEPSV ENQSGKDIDA LNPSVDKGVA AQTTDSGCGN QSCIPQGNAT RPSLMERNGT 420 AHTYEWEDSI DGSPGGMTNR AGRPHLPSPK RKIVSPLKKY EVTKFVRRRR LKRWSLLEED 480 TLRTGVQKYG KGNWKLILNS YRDIFDERTE VDLKDKWRNM TRY

Sequence ? help Back to Top

Protein Sequence Length: 523 aa Download sequence

MDPDICRWIS EFLMRSTAPD HVIKKVLQVL PVSGADSRFK KTVLLRTIRS EIADASVTET  60
TLQTLELIEE MDRSEGVEIR DSLKAAYCAV AVECTVKYLL GSPDKHGEYF EAVKRVWRGR  120
IGNLEKYGKT ELVTDELTRW RDDLELALWE ANTAKRLTKL NTRTEALRAL RVFLGEAWAL  180
MGPSFLESAA ALIEPSDLQN LSGDQMPANN AGGLAAATVE AAEPAAAAAV VAVVDSSNVG  240
ELGVEEEVGA THPEPTVNGE GSREMGVNDK PAGRGKEIHK GNVLPRCKHV AWHKRSKGGV  300
RITEEVDTDA SPSKYDSLPT PEVNMIREAL KSSSLELQAV VNDPLPEALH LSETIIADMV  360
KKDKIHEPSV ENQSGKDIDA LNPSVDKGVA AQTTDSGCGN QSCIPQGNAT RPSLMERNGT  420
AHTYEWEDSI DGSPGGMTNR AGRPHLPSPK RKIVSPLKKY EVTKFVRRRR LKRWSLLEED  480
TLRTGVQKYG KGNWKLILNS YRDIFDERTE VDLKDKWRNM TRY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	450	470	KRKIVSPLKKYEVTKFVRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	8e-23	MYB_related family protein