PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023913306.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family C2H2
Protein Properties Length: 235aa    MW: 26415.5 Da    PI: 9.5268
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023913306.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.000196183123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C+ C++ F++   L  H+++H
  XP_023913306.1 61 YICSFCKREFRSAQALGGHMNVH 83
                    89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MDRNNLSNSL KDQIIDTKAI KYCNNNNNDN NKNMPKDSLN SDIQSYGDDY VNGFSWPPKS  60
YICSFCKREF RSAQALGGHM NVHRRDRARL RQSSPPRDGQ YPMLNLNYKS NPNPKFSSSS  120
SSSSLSSTST RLTPFASSLP SLISPSLSPF TTPSSESAAD EVKKWGLVGN LFGSLSHKNM  180
DLTNMKNEKS LDRFKQEDKC KILKKSEIVR LDLEIGVLGN SREDLDLELR LGYSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23130.18e-25C2H2 family protein