PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023913287.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 306aa MW: 34588.9 Da PI: 6.2619 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.6 | 4.9e-07 | 15 | 72 | 1 | 43 |
TSSS-HHHHHHHHHHHHHT...TTT........-HHHHHHHHT....TTS-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkql...Ggg........tWktIartmg....kgRtlkqcksr 43 r rWT+ +d++++d+v ++ G++ tW++I ++++ ++ +q++ + XP_023913287.1 15 RTRWTPSLDKIFADLVVKHiqlGNRpnnvfdkkTWNLIREEFNnqtdLNFNNNQLRKH 72 78*************9765222777******************665555555666666 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence |
MDSEASHQPK LERSRTRWTP SLDKIFADLV VKHIQLGNRP NNVFDKKTWN LIREEFNNQT 60 DLNFNNNQLR KHLDVLRTRF YNLKSALDQN NDFALDDSCC IGFDLWEDIG PRPEMVKVKD 120 CPIYEQLCVI FTDSAAEGKY AQSSHYEELD KSAGIDNAGL NSCQDGGTPL SANPSSLKPA 180 QGIMSSAERT MKNNVEKKRK RPSETHSSSG QSRKDREIHD AMAEAMFEMV AALKSRAVAK 240 TPSDEKFTIT NCIRALDEIP GIDETLYFAA LDLFEDPNLR ETFISLKGNN IRLTWLQGKC 300 GKTTCS |