PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023913086.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 580aa MW: 64324.4 Da PI: 4.3521 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 122.1 | 5e-38 | 8 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra...........tksgy 82 lp+GfrF+P+d+el+ +yLk+k++g++ ++ +i+e++ y+ ePwdLp k +++e++ew+fF+ + k+++++ k+r+ tk+g+ XP_023913086.1 8 LPAGFRFSPKDKELIEFYLKPKITGNDKDI-WFIPEIEFYEDEPWDLPiKtGIASEDQEWFFFTVLSPKHQNDNPKKRKrgqkqelvnrqTKAGF 101 799************************999.78***************6346777999******99999998887777667788888888***** PP NAM 83 WkatgkdkevlskkgelvglkktLvfykg...rapkgektdWvmheyrl 128 Wk+tgkd+e+ s +g +vg+kk+Lvf++g + kg t+Wvmhey+ XP_023913086.1 102 WKSTGKDREIES-GGVVVGTKKSLVFHRGstkGKGKGIGTNWVMHEYST 149 ***********9.**************763114557789********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 580 aa Download sequence |
MVVLSFDLPA GFRFSPKDKE LIEFYLKPKI TGNDKDIWFI PEIEFYEDEP WDLPIKTGIA 60 SEDQEWFFFT VLSPKHQNDN PKKRKRGQKQ ELVNRQTKAG FWKSTGKDRE IESGGVVVGT 120 KKSLVFHRGS TKGKGKGIGT NWVMHEYSTT QKEFDGRHPG QKSFVLCRLF NNEEKSNKGG 180 PAKSKPALSP VSPVLEVQAE ISDQMMSDVT DHVQCNNDNK HHKAYVADDQ AEGVDLSEED 240 MELLMDAFYV PSEDSPSSLL LTTTDVSTPI TVKSSHKETQ SEPTLAPASQ ELPEQVEYHP 300 ITCITRFDNA APLACNDDYN AYAAENQMAE VNTAEVGLDL DMDKAFERFF IPPPGSVDCN 360 LFSPSTSTPV TAVSMSPDFG SEADNYCPSF RRLPEENSDG ITTDTIVPIE YNGYNTHVAN 420 NQVAEVTSDE ADLQVEAGTN MFPDTPQPLG CDMLSPLHSH MQADLGSSCM SYPFTNDLNS 480 GYWRVHHQSG MNVPAPNFSE SRDLTLINPD EFFRKMSSSQ TNLAFDDGTL KNMVSDKDNG 540 SCSGSDANAL LFVLVDPELV SLDEILNPEV SSGLLNQDHT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49530.1 | 9e-44 | NAC family protein |