PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913086.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 580aa MW: 64324.4 Da PI: 4.3521

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	122.1	5e-38	8	149	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra...........tksgy 82 lp+GfrF+P+d+el+ +yLk+k++g++ ++ +i+e++ y+ ePwdLp k +++e++ew+fF+ + k+++++ k+r+ tk+g+ XP_023913086.1 8 LPAGFRFSPKDKELIEFYLKPKITGNDKDI-WFIPEIEFYEDEPWDLPiKtGIASEDQEWFFFTVLSPKHQNDNPKKRKrgqkqelvnrqTKAGF 101 799**********************999.78***********6346777999**99999998887777667788888888* PP NAM 83 WkatgkdkevlskkgelvglkktLvfykg...rapkgektdWvmheyrl 128 Wk+tgkd+e+ s +g +vg+kk+Lvf++g + kg t+Wvmhey+ XP_023913086.1 102 WKSTGKDREIES-GGVVVGTKKSLVFHRGstkGKGKGIGTNWVMHEYST 149 *******9.**********763114557789******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MVVLSFDLPA GFRFSPKDKE LIEFYLKPKI TGNDKDIWFI PEIEFYEDEP WDLPIKTGIA 60 SEDQEWFFFT VLSPKHQNDN PKKRKRGQKQ ELVNRQTKAG FWKSTGKDRE IESGGVVVGT 120 KKSLVFHRGS TKGKGKGIGT NWVMHEYSTT QKEFDGRHPG QKSFVLCRLF NNEEKSNKGG 180 PAKSKPALSP VSPVLEVQAE ISDQMMSDVT DHVQCNNDNK HHKAYVADDQ AEGVDLSEED 240 MELLMDAFYV PSEDSPSSLL LTTTDVSTPI TVKSSHKETQ SEPTLAPASQ ELPEQVEYHP 300 ITCITRFDNA APLACNDDYN AYAAENQMAE VNTAEVGLDL DMDKAFERFF IPPPGSVDCN 360 LFSPSTSTPV TAVSMSPDFG SEADNYCPSF RRLPEENSDG ITTDTIVPIE YNGYNTHVAN 420 NQVAEVTSDE ADLQVEAGTN MFPDTPQPLG CDMLSPLHSH MQADLGSSCM SYPFTNDLNS 480 GYWRVHHQSG MNVPAPNFSE SRDLTLINPD EFFRKMSSSQ TNLAFDDGTL KNMVSDKDNG 540 SCSGSDANAL LFVLVDPELV SLDEILNPEV SSGLLNQDHT

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MVVLSFDLPA GFRFSPKDKE LIEFYLKPKI TGNDKDIWFI PEIEFYEDEP WDLPIKTGIA  60
SEDQEWFFFT VLSPKHQNDN PKKRKRGQKQ ELVNRQTKAG FWKSTGKDRE IESGGVVVGT  120
KKSLVFHRGS TKGKGKGIGT NWVMHEYSTT QKEFDGRHPG QKSFVLCRLF NNEEKSNKGG  180
PAKSKPALSP VSPVLEVQAE ISDQMMSDVT DHVQCNNDNK HHKAYVADDQ AEGVDLSEED  240
MELLMDAFYV PSEDSPSSLL LTTTDVSTPI TVKSSHKETQ SEPTLAPASQ ELPEQVEYHP  300
ITCITRFDNA APLACNDDYN AYAAENQMAE VNTAEVGLDL DMDKAFERFF IPPPGSVDCN  360
LFSPSTSTPV TAVSMSPDFG SEADNYCPSF RRLPEENSDG ITTDTIVPIE YNGYNTHVAN  420
NQVAEVTSDE ADLQVEAGTN MFPDTPQPLG CDMLSPLHSH MQADLGSSCM SYPFTNDLNS  480
GYWRVHHQSG MNVPAPNFSE SRDLTLINPD EFFRKMSSSQ TNLAFDDGTL KNMVSDKDNG  540
SCSGSDANAL LFVLVDPELV SLDEILNPEV SSGLLNQDHT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49530.1	9e-44	NAC family protein