PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023913083.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

NAC

Protein Properties

Length: 428aa MW: 47591.5 Da PI: 4.975

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023913083.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	122.4	4.1e-38	9	150	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknra...........tksgy 82 lppG+rF+P+d e++ yLk+k+ g++ ++ +i+e++ y+ ePwdLp k +++e++ew+fF+ ++ k++++++k+r+ tk+g+ XP_023913083.1 9 LPPGVRFSPKDPEVIELYLKNKIIGNDKDT-WFIPELKFYEDEPWDLPiKsGIATEDQEWFFFTGQSLKHQKDNQKKRKrgqkqelvnrqTKAGF 102 79***********************888.78**********96347777999*****99999998888778999999999* PP NAM 83 WkatgkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyrl 128 Wk+tg d+e+ s +++l+g+kktLvf+ +++++k+ +t+Wvmheyr XP_023913083.1 103 WKSTGPDREIES-GESLIGMKKTLVFHigsNKKEEKAIRTNWVMHEYRT 150 *******9.999*******66556778888*******96 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MEKLSLDHLP PGVRFSPKDP EVIELYLKNK IIGNDKDTWF IPELKFYEDE PWDLPIKSGI 60 ATEDQEWFFF TGQSLKHQKD NQKKRKRGQK QELVNRQTKA GFWKSTGPDR EIESGESLIG 120 MKKTLVFHIG SNKKEEKAIR TNWVMHEYRT TQKEFDGKHP GQKALVLCRL FYNEEKSNKG 180 GPAKSKPARL AKKKSKPALA PVCPVLEVQA ENHQTSNQSC CAEISAQMMS DVTKLVHCNN 240 DNDLCPQTSG VGFSEEDIEL LMSVFYVPSE DFPSSLPLIP PDVSTPITVK SSHKETTLAP 300 ASQSEPTLAP ASQALPEQAE NHPIDCRTRF DNAAPLACNN DYNADAAENQ VAEVNTTEVD 360 WDLDIDEALE MFYITPPGPL DCNLFSPSTL NSTTPAVSYP TTADASLEEA QSLLAPASVS 420 PKLANFHG

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MEKLSLDHLP PGVRFSPKDP EVIELYLKNK IIGNDKDTWF IPELKFYEDE PWDLPIKSGI  60
ATEDQEWFFF TGQSLKHQKD NQKKRKRGQK QELVNRQTKA GFWKSTGPDR EIESGESLIG  120
MKKTLVFHIG SNKKEEKAIR TNWVMHEYRT TQKEFDGKHP GQKALVLCRL FYNEEKSNKG  180
GPAKSKPARL AKKKSKPALA PVCPVLEVQA ENHQTSNQSC CAEISAQMMS DVTKLVHCNN  240
DNDLCPQTSG VGFSEEDIEL LMSVFYVPSE DFPSSLPLIP PDVSTPITVK SSHKETTLAP  300
ASQSEPTLAP ASQALPEQAE NHPIDCRTRF DNAAPLACNN DYNADAAENQ VAEVNTTEVD  360
WDLDIDEALE MFYITPPGPL DCNLFSPSTL NSTTPAVSYP TTADASLEEA QSLLAPASVS  420
PKLANFHG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	86	QKDNQKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.2	6e-45	NAC family protein