PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023912927.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 247aa MW: 27514.9 Da PI: 5.832 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 63 | 112 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++ +Wv+e+r+p +k+ r++lg+f t+++Aa+a++ a+++l+g XP_023912927.1 63 IYRGVRQRN-GTKWVSEVREP---NKKSRIWLGTFPTPDMAARAHDVAALALRG 112 69****998.899****9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDFESESLSS SSSSSSSQLS PYSPCNPSYC SSSSSSSSSS QASLKSHKRK SGRKKFKETR 60 HPIYRGVRQR NGTKWVSEVR EPNKKSRIWL GTFPTPDMAA RAHDVAALAL RGTLAELNFP 120 DSAWLVPRPN SSSAKDIQMA AQKAAEAFRP SDNKKEEKVL EPCLVDMQFM ESKKEVIEPK 180 ITLEILCESK DNPEQPGTFF LDEEALFNMP GLLESMAEGL ILTPPARQRG FDWDDLGCDL 240 DLTLWTD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25490.1 | 2e-49 | ERF family protein |