PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912590.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

GeBP

Protein Properties

Length: 310aa MW: 34999.1 Da PI: 6.7065

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	114.6	6e-36	133	229	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 klfqrlws++ ei lL+G++d++a ++++p ++ afyefvkks++++v+k qlv+K++rL+kK+ ++ + k+gk+p+fsk+h++k++elskki XP_023912590.1 133 KLFQRLWSDDNEIELLKGMLDYRAIHDSDPAANGAAFYEFVKKSLHVEVTKAQLVDKMKRLRKKYSNNAGRGKKGKDPTFSKPHERKTYELSKKI 227 579******************************************************************************************** PP DUF573 96 Wg 97 Wg XP_023912590.1 228 WG 229 *8 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MAQKQRPSHR DDPPAVSSSN EEEEEETFSD DDEEEEEEAA GGEEEEGGEQ SSSEEEEPST 60 PPRKPSSSSS GSKAKPREPE STPVKATHAR STRSSIMKKK RPNSERDATP SKRVKKKDPD 120 PEPKSQGGAE EKKLFQRLWS DDNEIELLKG MLDYRAIHDS DPAANGAAFY EFVKKSLHVE 180 VTKAQLVDKM KRLRKKYSNN AGRGKKGKDP TFSKPHERKT YELSKKIWGC AAADGVSGKC 240 LNRILSFNKN VVLEERLIKK GLELIGQQKR LELEERWKRV ELAELQMYVT QAELIRDQAS 300 LILEAYKGQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00390.1	1e-32	GeBP family protein