PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023912375.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

G2-like

Protein Properties

Length: 480aa MW: 52505.3 Da PI: 5.5872

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023912375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.1	9.5e-34	255	309	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+ LGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_023912375.1 255 KPRMRWTPELHESFVEAVNLLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 309 79****************************************************8 PP
2	Myb_DNA-binding	53.6	5.1e-17	257	308	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av++lGg t+k + + m +g+t +++ks++qky+ XP_023912375.1 257 RMRWTPELHESFVEAVNLLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 308 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MEARPALSFQ RPGAKQLSSM GMSGALSTSL PVLPTPLEET YPKLPDSQQV SMERELVTRP 60 LNHASHLSSN SSVVGHMFSS SSGFSTDLHY SSISPHEKHS RHSPFISQSS TNAASLPITH 120 SSGSLQSTAS HYAKENSASW QTDSLSSFLD FPVNTPIENS QVEISSCNAA LASEEFTKWA 180 DQLISDDDAL ASNWNELLGD TSVTDLEPKM VFPVSKSSPN FQAHQSQVPL QLPATSGEIR 240 AVANPTSLAN SAPAKPRMRW TPELHESFVE AVNLLGGSER ATPKGVLKLM KVEGLTIYHV 300 KSHLQKYRTA RYRPESSEGS SEKKLTPIEE MSLDLKTGIE ITEALRMQME VQKRLHEQLE 360 IQRNLQLRIE EQGRCLQKMF EKQCKSGVDK LKTSATTLEN PSTPSLDTVQ ESPAKSELDA 420 SQVDHGKTGT DPVNANTALE ESSQELGGKH KVSEANDPEN SEPDACESSS QPSKRPRTDE

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MEARPALSFQ RPGAKQLSSM GMSGALSTSL PVLPTPLEET YPKLPDSQQV SMERELVTRP  60
LNHASHLSSN SSVVGHMFSS SSGFSTDLHY SSISPHEKHS RHSPFISQSS TNAASLPITH  120
SSGSLQSTAS HYAKENSASW QTDSLSSFLD FPVNTPIENS QVEISSCNAA LASEEFTKWA  180
DQLISDDDAL ASNWNELLGD TSVTDLEPKM VFPVSKSSPN FQAHQSQVPL QLPATSGEIR  240
AVANPTSLAN SAPAKPRMRW TPELHESFVE AVNLLGGSER ATPKGVLKLM KVEGLTIYHV  300
KSHLQKYRTA RYRPESSEGS SEKKLTPIEE MSLDLKTGIE ITEALRMQME VQKRLHEQLE  360
IQRNLQLRIE EQGRCLQKMF EKQCKSGVDK LKTSATTLEN PSTPSLDTVQ ESPAKSELDA  420
SQVDHGKTGT DPVNANTALE ESSQELGGKH KVSEANDPEN SEPDACESSS QPSKRPRTDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	5e-92	G2-like family protein