PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023912244.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 244aa MW: 27948.7 Da PI: 9.2967 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_023912244.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 89.8 | 5.1e-30 | 85 | 173 | 12 | 100 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ e +++e+ kLk++ e+ q++qR+llGedL++L+ ++L++Le+qL++slk++Rs+K++++l+q+++lq+ke+ l e+n+aL+ kl+e XP_023912244.1 85 KELEISYREYLKLKARFESVQQTQRNLLGEDLGPLNTNDLERLERQLDSSLKQVRSTKTQYMLDQLSDLQNKEHLLVEANRALTIKLDE 173 5677889****************************************************************************999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCST 60 SSMLKTLERY QKCSYGAVEV NKPGKELEIS YREYLKLKAR FESVQQTQRN LLGEDLGPLN 120 TNDLERLERQ LDSSLKQVRS TKTQYMLDQL SDLQNKEHLL VEANRALTIK LDEISSRNNL 180 RQSWEGGEQS MSYGPQNAQS QRFFQPLDCN PTLQIGYNAS GSDQQLSGTT HAQQVNGFIP 240 GWML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02310.1 | 1e-127 | MIKC_MADS family protein |