PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023912243.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 243aa MW: 27894.1 Da PI: 9.697 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93.7 | 8.8e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eyss XP_023912243.1 9 KRIENKISRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 104.4 | 1.4e-34 | 79 | 174 | 5 | 100 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + ++++++++ ++ e+ kL +++e Lqr++R+++GedL++Ls++eLq+Leqq++ +lk+iR++Kn+l++e++ elqkkek+lqe+n+ L kkl+ XP_023912243.1 79 QLVATDSETQGGWCMEFPKLTARVEVLQRNIRNFMGEDLDPLSFRELQNLEQQIDAGLKRIRTRKNQLMHESVMELQKKEKSLQEQNNLLAKKLK 173 555567777889*********************************************************************************98 PP K-box 100 e 100 e XP_023912243.1 174 E 174 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRGRVQLKR IENKISRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSSD 60 SSMETILERY ERYSFAERQL VATDSETQGG WCMEFPKLTA RVEVLQRNIR NFMGEDLDPL 120 SFRELQNLEQ QIDAGLKRIR TRKNQLMHES VMELQKKEKS LQEQNNLLAK KLKENEKNMP 180 EKAHQEQPSL GLLSLPQQPM PSTLPLPSLT IGGAFQERAV DEDAGVQTRP TVMPPWMLRH 240 VNG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69120.1 | 1e-84 | MIKC_MADS family protein |