PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023912134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | G2-like | ||||||||
Protein Properties | Length: 281aa MW: 31899.7 Da PI: 6.5027 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.6 | 1.4e-28 | 169 | 223 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++Wt++LHe+Fv++v++LGG+ekA Pk+ilelm+ + Lt+ +vkSHLQkYR+ XP_023912134.1 169 KKRIKWTQDLHEQFVKCVNRLGGAEKAKPKAILELMDTNLLTIFNVKSHLQKYRT 223 68****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 40.8 | 5.2e-13 | 173 | 222 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 +WT++++e++v++v++lGg +k+I + m + +t ++ks++qky+ XP_023912134.1 173 KWTQDLHEQFVKCVNRLGGAekaKPKAILELMDtNLLTIFNVKSHLQKYR 222 8*****************99**************99*************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MDDFSQLYCT EPPLITPAMN DSFKSLASAF HAAETYMEFQ QKYEHQVGNS PSASQFPTYD 60 SHILSSCQSS GDNNCSTDSA EQSSSNFDFK DSLQSLVKSH LCSNYYCYSS EMSNMVTSNN 120 SGKPFPHDQN MLLCENAAFV RRQLSVPDHA NQALNVCQSS STRPAPSNKK RIKWTQDLHE 180 QFVKCVNRLG GAEKAKPKAI LELMDTNLLT IFNVKSHLQK YRTAVHMPDY SVEEISERRT 240 RADGRIPHQL PMKISSMQMK ETLQLQLEVE RSLNEQLEVQ Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.2 | 2e-38 | G2-like family protein |