PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911869.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 286aa    MW: 31013.5 Da    PI: 8.974
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911869.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.48.6e-32134188358
       CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     p+YVN+KQy++Il+RRq+Rakle+++kl  k+rkpylheSRh+hAl+R Rg+gGrF
  XP_023911869.1 134 PIYVNPKQYHGILRRRQSRAKLEAQNKL-VKARKPYLHESRHRHALNRTRGTGGRF 188
                     9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDSPPQQIHE AKHLGLQLPD QESSTIQFTG QSHHEVGAVG GTNSQGQCIS SESDQDEGCG  60
NAKGQMKAGF LLNNSDFMFN PSQVARSYSM ARVPYPYAEP CVGGLLTAYG PQAIMMGMAP  120
ARVPLPLDFT DYGPIYVNPK QYHGILRRRQ SRAKLEAQNK LVKARKPYLH ESRHRHALNR  180
TRGTGGRFLS TKKGQNPDPT ATSSNHYVSD TENISDFDSS QFGTRQHVGS ITACSDITSV  240
SNRNGNNAYQ QPGHRFSGLS PHLGGAMQCN GSLVPGGTQH CASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-49NF-YA family protein