PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911867.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family NF-YA
Protein Properties Length: 316aa    MW: 34358.3 Da    PI: 9.3558
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.21e-31164218358
       CBFB_NFYA   3 plYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     p+YVN+KQy++Il+RRq+Rakle+++kl  k+rkpylheSRh+hAl+R Rg+gGrF
  XP_023911867.1 164 PIYVNPKQYHGILRRRQSRAKLEAQNKL-VKARKPYLHESRHRHALNRTRGTGGRF 218
                     9***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MPHLTVKCSS WWNSNEQKIP SSSSKTASLK MDSPPQQIHE AKHLGLQLPD QESSTIQFTG  60
QSHHEVGAVG GTNSQGQCIS SESDQDEGCG NAKGQMKAGF LLNNSDFMFN PSQVARSYSM  120
ARVPYPYAEP CVGGLLTAYG PQAIMMGMAP ARVPLPLDFT DYGPIYVNPK QYHGILRRRQ  180
SRAKLEAQNK LVKARKPYLH ESRHRHALNR TRGTGGRFLS TKKGQNPDPT ATSSNHYVSD  240
TENISDFDSS QFGTRQHVGS ITACSDITSV SNRNGNNAYQ QPGHRFSGLS PHLGGAMQCN  300
GSLVPGGTQH CASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.17e-52NF-YA family protein