PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023911687.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 86aa MW: 9577.79 Da PI: 9.5129 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.6 | 9e-11 | 10 | 55 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 ++WT+ E + + +a + + ++ +W+ +a+ +g g+t++q+k ++ XP_023911687.1 10 DSWTAKENKAFERALAVYDKDtpdRWHNVAKAVG-GKTPEQVKRHYE 55 58********************************.**********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence |
MASGSMSSSD SWTAKENKAF ERALAVYDKD TPDRWHNVAK AVGGKTPEQV KRHYELLVED 60 VKHIESGRVP LPKYKTTGSS PTVKDM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.1 | 4e-38 | MYB_related family protein |