PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023911599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 226aa MW: 25742.7 Da PI: 7.0331 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.4 | 3.2e-08 | 3 | 46 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 W Ed+++ +a + + + +W +Ia+ ++ g+++ ++k+++ XP_023911599.1 3 WNRSEDKIFEQALVMVPEDvpdRWQRIAEQIP-GKSPRDVKEHYD 46 999*****************************.**********95 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.2e-15 | 109 | 153 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + k++G+g+W++I+r + +Rt+ q+ s+ qky XP_023911599.1 109 PWTEEEHRLFLTGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKY 153 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MMWNRSEDKI FEQALVMVPE DVPDRWQRIA EQIPGKSPRD VKEHYDDLVH DVLEIDCGRV 60 ELPSYADDND SDSGGHGGWD SPSNQNQISF SNHNNKPKHS DSERKKGTPW TEEEHRLFLT 120 GLKKFGKGDW RSISRNVVVT RTPTQVASHA QKYFLRQNSV KKERKRSSIH DITADNNPVA 180 LPVNQSWLPP PGSAVQQQQA YQPMTMPPHL PGQVSPMGYQ GFGFQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04760.1 | 5e-82 | MYB family protein |