PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911568.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 349aa    MW: 39045.3 Da    PI: 9.1295
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911568.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.43.5e-17295327133
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     C++C+  +Tp WRrgpdg +tLCnaCGl+y+k 
  XP_023911568.1 295 CHSCNRAETPEWRRGPDGARTLCNACGLHYAKL 327
                     ******************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MGGQVSKVMA KIFGSKEMRL LMLGLDAAGK TTILYKLKLD TDVTTIPTVG FNVESVTYKN  60
TKFNVWDVGG QDKIRPLWRH YFSGTQGLIF VIDSNDRDRM DEAKNELQRI IQDREMKDAL  120
LLVFANKQDI AGSMRPKEVS DMLELDRVAK NHVWKVEPSC ATTGEGIFEG LAWLSNNIAS  180
ASSITSDFAR RYDDQLQQPG RSLSTIQSLP GLVEVDDMIS KSRVQLESLM RIRDFVVDQR  240
ALYEQEAADQ RQQKLLLDQS HGDLEYLQDG GDGKTRFAGS DAKKRRGRAA PPGRCHSCNR  300
AETPEWRRGP DGARTLCNAC GLHYAKLTRK QQSSNKTAAA GSSNLRPKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18380.12e-11GATA family protein