PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023911546.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 988aa MW: 107806 Da PI: 6.0299

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023911546.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	55.9	7.6e-18	243	313	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...................TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkas................kapskKlsKaeiLekAveYIksLq 55 ++++hn +E+r+R+++N+++ eLr +P++ +p+ Kl+Ka++ kA+eYI++L+ XP_023911546.1 243 KKTSHNVIEKRYRNNLNDKIVELRNSVPSLRamgktngasrgedlegLTPAHKLNKATVMGKATEYIRHLE 313 799************************777***********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 988 aa Download sequence
MDSKMWQDQG MFGVQPGDDH GENWEDWLRW DPAAEQEGTS PENGTVTTAG SSKNDSPLQE 60 NIFPVEGFGN KTLDAETLSP PMILGVDSLD FATESLAIDQ PFLFGDTDNA AFDLDRAMNT 120 PFTPAQPTEA MVDTDVPSWP AIPDVPQDKL TLSTVSIGQD ENVFVQNGPS SAASTATFNL 180 QYSPQSSSHT YDKTSSNKSQ SSSPKPPPKK RGGRKRKVDV EAERQQKEEN EQGSQDGDEP 240 PLKKTSHNVI EKRYRNNLND KIVELRNSVP SLRAMGKTNG ASRGEDLEGL TPAHKLNKAT 300 VMGKATEYIR HLEKRNKNMA DEMDMLKARL AAVEAAIGRS DDRRLSTSNS PAGSFARSRE 360 GSSTSQGFLH VPQDQSRYGP TTIQPQYSQQ QQQPTYARQP NPPVDAQNQP HYVNGRGGGA 420 VTKIMMGAMA GIMVMEGFQQ SDEETHGLAA LPGDILRRGL DLVSPSSPYS RQALVPLMKV 480 VLVIGCLFYL FMPLLTISKG RPHSKSRTAV RLPHAPSLAS PVEVRRKAWL TAMQTVYVPK 540 HFLLEVVNVL SKMAILSTRR LIGSEAYNSL TGTNKEEEAA RVKAWDIAID AQLAGGDAEV 600 SYYHLLLTLM ASGTLPDSPT RLMQKAVHFR VFFWDVANAG YGNILGFKSF TEKVGKFYWD 660 SARRLQKELL HAQAQGRPSA GCESELLPDT LASLLELDCD DVLSDEMIQR AWNLAWNKPS 720 AYALTPHAAK DSVVEDHAIR SPLDAVAAWY ANMTVDDTLM EVLGEHHSSL DTEYYIFLAI 780 SIAPPASATH VRALAAKAVL FNRKRDSNII AALDAFPITT PAIADSMNLV SHAPASPDVC 840 MALTLAKLLA LLSSSQSLAA RKRACQMLAN LHLAPEDISL LSAVAAYRLL RMSHHDRCMP 900 EATSQGLEDL AANLRLWIGT SAGRNVGLHR EGCGRIVDLC LAVARKFGGW EEQDSGYGSA 960 SPSASVLASD DSSPTRERLT EISEVPSS

Sequence ? help Back to Top

Protein Sequence Length: 988 aa Download sequence

MDSKMWQDQG MFGVQPGDDH GENWEDWLRW DPAAEQEGTS PENGTVTTAG SSKNDSPLQE  60
NIFPVEGFGN KTLDAETLSP PMILGVDSLD FATESLAIDQ PFLFGDTDNA AFDLDRAMNT  120
PFTPAQPTEA MVDTDVPSWP AIPDVPQDKL TLSTVSIGQD ENVFVQNGPS SAASTATFNL  180
QYSPQSSSHT YDKTSSNKSQ SSSPKPPPKK RGGRKRKVDV EAERQQKEEN EQGSQDGDEP  240
PLKKTSHNVI EKRYRNNLND KIVELRNSVP SLRAMGKTNG ASRGEDLEGL TPAHKLNKAT  300
VMGKATEYIR HLEKRNKNMA DEMDMLKARL AAVEAAIGRS DDRRLSTSNS PAGSFARSRE  360
GSSTSQGFLH VPQDQSRYGP TTIQPQYSQQ QQQPTYARQP NPPVDAQNQP HYVNGRGGGA  420
VTKIMMGAMA GIMVMEGFQQ SDEETHGLAA LPGDILRRGL DLVSPSSPYS RQALVPLMKV  480
VLVIGCLFYL FMPLLTISKG RPHSKSRTAV RLPHAPSLAS PVEVRRKAWL TAMQTVYVPK  540
HFLLEVVNVL SKMAILSTRR LIGSEAYNSL TGTNKEEEAA RVKAWDIAID AQLAGGDAEV  600
SYYHLLLTLM ASGTLPDSPT RLMQKAVHFR VFFWDVANAG YGNILGFKSF TEKVGKFYWD  660
SARRLQKELL HAQAQGRPSA GCESELLPDT LASLLELDCD DVLSDEMIQR AWNLAWNKPS  720
AYALTPHAAK DSVVEDHAIR SPLDAVAAWY ANMTVDDTLM EVLGEHHSSL DTEYYIFLAI  780
SIAPPASATH VRALAAKAVL FNRKRDSNII AALDAFPITT PAIADSMNLV SHAPASPDVC  840
MALTLAKLLA LLSSSQSLAA RKRACQMLAN LHLAPEDISL LSAVAAYRLL RMSHHDRCMP  900
EATSQGLEDL AANLRLWIGT SAGRNVGLHR EGCGRIVDLC LAVARKFGGW EEQDSGYGSA  960
SPSASVLASD DSSPTRERLT EISEVPSS