PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023911461.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 446aa MW: 48098.8 Da PI: 7.9978

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023911461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	58.7	1e-18	286	336	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h+ +Er+RR+++++ feeL + +P++ +++K sK eiL+kA++YI++ q XP_023911461.1 286 RVSHKLAERKRRSEMKDLFEELNKAVPSS---GGTKASKWEILTKAIDYIRNTQ 336 89*************************...****************9866 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MGLAAKGEGE CDWNGGVREM GEMLKGTDNS ANSGLQVHTL LNPDDSPLRN SVPSTPLSVN 60 LRNSTASGGS SILPSINQGF HQDGNRDSYA SMESRRSSVD SRMHQGFSNM YINNSTNPGS 120 PYENSSQNGS HTSLAQNLRR PGPGGPMSPL NGRSSLRGHP APRIAPPIAP AGQRGAGADP 180 TASRPTPGHA WAFPDEAIPE ERHGSESGES SLENSVSRAN SFAASSIRSS IFSNDSQMPQ 240 GQRRFDDGDP STHHHSMGQH RTIQSLQGET MSGQGVGNYS RTPELRVSHK LAERKRRSEM 300 KDLFEELNKA VPSSGGTKAS KWEILTKAID YIRNTQHDAR QLHQEVTRLQ RDADYTRDSI 360 KENEMLKTEI QVMHQNLRRL DPNAPHVYGH LTSQLQQAAS SGQSNGASNI SLPPLAPTQP 420 PPPVPFNGAP PAAAPMQGVE YGGYGR

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MGLAAKGEGE CDWNGGVREM GEMLKGTDNS ANSGLQVHTL LNPDDSPLRN SVPSTPLSVN  60
LRNSTASGGS SILPSINQGF HQDGNRDSYA SMESRRSSVD SRMHQGFSNM YINNSTNPGS  120
PYENSSQNGS HTSLAQNLRR PGPGGPMSPL NGRSSLRGHP APRIAPPIAP AGQRGAGADP  180
TASRPTPGHA WAFPDEAIPE ERHGSESGES SLENSVSRAN SFAASSIRSS IFSNDSQMPQ  240
GQRRFDDGDP STHHHSMGQH RTIQSLQGET MSGQGVGNYS RTPELRVSHK LAERKRRSEM  300
KDLFEELNKA VPSSGGTKAS KWEILTKAID YIRNTQHDAR QLHQEVTRLQ RDADYTRDSI  360
KENEMLKTEI QVMHQNLRRL DPNAPHVYGH LTSQLQQAAS SGQSNGASNI SLPPLAPTQP  420
PPPVPFNGAP PAAAPMQGVE YGGYGR