PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911333.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 87aa    MW: 10635.1 Da    PI: 9.8561
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.53e-082968445
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++++E++l+++  k+ G + W++Ia +++ gR ++++  +w 
   XP_023911333.1 29 MSEQEEDLIYRMYKLVGDR-WALIAGRIP-GRKAEEIERFWI 68
                     79***************99.*********.*********995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MDKRRRKQAK TSSCYSEEVS SIEWEFINMS EQEEDLIYRM YKLVGDRWAL IAGRIPGRKA  60
EEIERFWIMR HGEVFASRRR ELKRYNS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
128DKRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46410.14e-41MYB_related family protein