PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023911217.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 130aa    MW: 14709.7 Da    PI: 10.3279
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023911217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-1683128247
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +rWT+eE++l++ + +qlG+++Wk I++++ +++t+ q+ s+ qky
   XP_023911217.1  83 KRWTEEEHKLFLSGLNQLGKHDWKEISQKFVTTKTPAQIASHAQKY 128
                      69*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MVRERRCSQC GLTGHNFRNC TSSVISNTAN NNTNAAACIK IFGVYLQNNV NGNVENNKRQ  60
VVREPSIAVD QKTKVNLLFV SGKRWTEEEH KLFLSGLNQL GKHDWKEISQ KFVTTKTPAQ  120
IASHAQKYFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G70000.28e-25MYB_related family protein