PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023910831.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 210aa MW: 23934.1 Da PI: 8.8596 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.5 | 8.5e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l d++k +G g W++ a++ ++R++k+c++rw +yl XP_023910831.1 14 KGLWTKEEDKILTDYIKVHGEGKWNLAAKKTDLKRCGKSCRLRWMNYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 59.2 | 8.9e-19 | 68 | 112 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T+eE++l+++++++lG++ W++Ia+ ++ gRt++q+k++w+++l XP_023910831.1 68 GSFTEEEEDLIIRLHNLLGNR-WSLIAKLVP-GRTDNQVKNYWNSHL 112 78*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MTKKMMEEGN TYKKGLWTKE EDKILTDYIK VHGEGKWNLA AKKTDLKRCG KSCRLRWMNY 60 LSPNVKQGSF TEEEEDLIIR LHNLLGNRWS LIAKLVPGRT DNQVKNYWNS HLSKKLGLKK 120 QNSHLGVTGL NNSRTVIVSE TARTVSPCCN TSKAIEDEAS IGTQNFGKAL DSKESEISKS 180 YINSFWEYSE SDLDLSNPDG LLGWDFFNFA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 2e-67 | MYB family protein |