PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023910778.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

MYB_related

Protein Properties

Length: 633aa MW: 67289.1 Da PI: 6.2176

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023910778.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.9e-09	206	250	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W+++Ed+ l+ av++ G g+W+ I r Rt+ q+ rw XP_023910778.1 206 RKPWSEDEDLELIAAVQKCGEGNWANILRGDFkGDRTATQLSQRW 250 789************************984223588888888888 PP

Sequence ? help Back to Top
Protein Sequence Length: 633 aa Download sequence
MVEKTKKQKK SFISEDDISS LLQRYSATTV LALLQEVTHS AEVNMDWNAL VKNTSTGISD 60 AREYQMLWRH LAYHHTLLHK FDHGAQLLDD DSDLESEVEA FPPVSCESST EAAACVKVLI 120 ASGLPSDTSI PTSSIVEAPL TINIPSGSSS RDSPSENSEA ACSMQGMNIT VPVSVQKQTL 180 PSAAAPHELL DANGSANGSM PLRRKRKPWS EDEDLELIAA VQKCGEGNWA NILRGDFKGD 240 RTATQLSQRW AIIRKRRGIL NVGTNPSGSQ LSEERRAAHH AISLALMPVK SLTAARPAGT 300 NTTSNSVLPT TTAEAVKIGS SSLQAKGQSQ QGPVPKKSSP VGSLGSTEKS RVSAKKPLTK 360 PGICSDSALR ETAVAAGARI ASPSDVASFI KATQAKNAVH IKPTGVSSTK LPMPRGVSTQ 420 IETQTNVRYV GTGLEAASSS SHPAVTVIPT ASHSGSVKAV SPTIQHSPST FATSLKMSSE 480 QTNIVSSTLP SEVLPKQEVK TAEEIKASAS GNAPKEQVQE DKAPSSDTET VSKIQMTDVK 540 NPNSSLNMKT DDSAEGTVVD DQAETRQNAN ENEMMSSPVR GDNQSAPEVN SENQSANEKR 600 ANLPSMIEDE CGEKQEVLIK IEAGNEIEGE KVK

Sequence ? help Back to Top

Protein Sequence Length: 633 aa Download sequence

MVEKTKKQKK SFISEDDISS LLQRYSATTV LALLQEVTHS AEVNMDWNAL VKNTSTGISD  60
AREYQMLWRH LAYHHTLLHK FDHGAQLLDD DSDLESEVEA FPPVSCESST EAAACVKVLI  120
ASGLPSDTSI PTSSIVEAPL TINIPSGSSS RDSPSENSEA ACSMQGMNIT VPVSVQKQTL  180
PSAAAPHELL DANGSANGSM PLRRKRKPWS EDEDLELIAA VQKCGEGNWA NILRGDFKGD  240
RTATQLSQRW AIIRKRRGIL NVGTNPSGSQ LSEERRAAHH AISLALMPVK SLTAARPAGT  300
NTTSNSVLPT TTAEAVKIGS SSLQAKGQSQ QGPVPKKSSP VGSLGSTEKS RVSAKKPLTK  360
PGICSDSALR ETAVAAGARI ASPSDVASFI KATQAKNAVH IKPTGVSSTK LPMPRGVSTQ  420
IETQTNVRYV GTGLEAASSS SHPAVTVIPT ASHSGSVKAV SPTIQHSPST FATSLKMSSE  480
QTNIVSSTLP SEVLPKQEVK TAEEIKASAS GNAPKEQVQE DKAPSSDTET VSKIQMTDVK  540
NPNSSLNMKT DDSAEGTVVD DQAETRQNAN ENEMMSSPVR GDNQSAPEVN SENQSANEKR  600
ANLPSMIEDE CGEKQEVLIK IEAGNEIEGE KVK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	208	LRRKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-79	MYB_related family protein