PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910728.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family GATA
Protein Properties Length: 302aa    MW: 32845.4 Da    PI: 5.9859
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.92.1e-16213249135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp+g+++LCnaCGl+++ +g+
  XP_023910728.1 213 CTHCGISSkaTPMMRRGPSGPRSLCNACGLFWANRGT 249
                     *****9999************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MYGHAQPLNM PNQIAADDDD VSCAGVESID NPHIRYETHS LDDETGAVVG SVVEDVTADA  60
AYTHTGVATG VSPDMGIQRH DGTSQLTLSF RGQVYVFDSV TPDKVQAVLL LLGGCELTSG  120
PQADMMNQNQ RGGVMDYPVK CSQPHRAASL NRFRQKRKER CFDKKVRYSV RQEVALRMQR  180
NKGQFTSARK SDGAYDWGVQ ESGQDDSPPE TSCTHCGISS KATPMMRRGP SGPRSLCNAC  240
GLFWANRGTL RDLSKKTQDH SMATAEQVEG EANDSDCGPA IHANNNLITY SNGDNSALMA  300
EH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24470.29e-93GATA family protein