PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023910673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 232aa MW: 26404.9 Da PI: 6.6815 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.4 | 1e-10 | 32 | 57 | 20 | 47 |
TTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 20 GggtWktIartmgkgRtlkqcksrwqky 47 G g+W++Iar+++ gRt++++k++w++ XP_023910673.1 32 G-GNWSLIARRLP-GRTDNEIKNYWNTI 57 3.37*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MALLSKIFGR KVDVTNINNS KSDMHVYGED EGGNWSLIAR RLPGRTDNEI KNYWNTILSK 60 RVQGDKTHEQ SSRILKSIGR IGKLTSDSNP GIKPIAHLVI RPKVVWCTKV ILPWQLDNNN 120 QMFNENIVPY GNSKNLFPSV QLENNISDFL IDLDINYLLR SDMKNSDGHQ TNVHDIVLDL 180 PISGCDVKVK DLMDEGKPEN WRATNPFQPN EAMDLNTLAS FLDSEDTWIS RK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27920.1 | 2e-11 | MYB family protein |