PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023910542.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NAC | ||||||||
Protein Properties | Length: 328aa MW: 36936.2 Da PI: 7.9856 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.8 | 1.5e-51 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeel+v+yL++kv+g++++l ++i ++d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ XP_023910542.1 14 LPPGFRFFPTDEELLVQYLCRKVAGHHFSL-QIIGDIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT- 106 79***************************9.89***************7777799*************************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+kk Lvfy g+apkg+kt+W+mheyrl XP_023910542.1 107 EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 999****************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MGVPETDPLS QLSLPPGFRF FPTDEELLVQ YLCRKVAGHH FSLQIIGDID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLL EHSRKNGSTK LDDWVLCRIY KKNSSAQKPT TSVPTSSKEQ 180 SNDSSSSSHL DDMLDSSFPE MNDSFFALPR VNSLKNFQND EKLNFQNLGS GNFDWASLAG 240 LNSVADLAVE NQAHQPQTQG IVNYNCNDVY VPSIPHLCHV DDEVQSGLRT NSGMFQQNSN 300 VSTQNYSNSL DPFGFRYPTQ SGGFGFRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-127 | NAC family protein |