PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023910485.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 198aa MW: 22775.5 Da PI: 5.8157 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.3 | 1.3e-18 | 10 | 62 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++f++eq++ Le +Fe+++ p ++ +++LA++lgL rqV +WFqNrRa+ k XP_023910485.1 10 MQRFSDEQIKLLEIMFEEESRPETRIKQKLANELGLHPRQVATWFQNRRARLK 62 578************************************************98 PP | |||||||
2 | HD-ZIP_I/II | 103.3 | 2e-33 | 10 | 100 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +r+s+eq+klLE +Feee++ e++ K++la+eLgl+prqva WFqnrRAR ktkq+E++y+ Lk++yd+l+++ e+L++e++ L +l++ XP_023910485.1 10 MQRFSDEQIKLLEIMFEEESRPETRIKQKLANELGLHPRQVATWFQNRRARLKTKQIEREYSLLKASYDTLASNFESLKTENQLLLLQLQK 100 589********************************************************************************99988876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MASKRKNKNM QRFSDEQIKL LEIMFEEESR PETRIKQKLA NELGLHPRQV ATWFQNRRAR 60 LKTKQIEREY SLLKASYDTL ASNFESLKTE NQLLLLQLQK LKNMLDKQHG KNGKSSDNNS 120 VKGDSTSKSK EKPSILSESV NHNINMFISD ANCEDAECTE EEPGMLNIAE PIDGSLTSSE 180 DWCSFLDQSS GNSQWWEL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 65 | RRARLKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.2 | 3e-36 | HD-ZIP family protein |