PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910422.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 260aa    MW: 28928.7 Da    PI: 9.241
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.85.8e-143680147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_023910422.1 36 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 80
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MNSQPTQNPQ SMATSSTPTD SSGKKVRKPY TITKSRESWT DEEHDKFLEA LQLFDRDWKK  60
IEDFVGSKTV IQIRSHAQKY FLKVQKNGTV AHVPPPRPKR KASHPYPQKA SKNGYSPWDE  120
TSMMINASSS QMVPSQDDFT SLHGIEADIA SKGVARISNS IPKQGKQAPV LHGLPDFSEV  180
YGFIGSVFDP EIDGHVQKLK EMDPINFETV LLLMRNLTVN LSSPDFEPIR NVLSSYDVNS  240
KTVGLAAGFV AKKQTSDLSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-119MYB_related family protein