PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023910414.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 280aa    MW: 30986.1 Da    PI: 9.2083
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023910414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.76.5e-143680147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   XP_023910414.1 36 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 80
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MNSQPTQNPQ SMATSSTPTD SSGKKVRKPY TITKSRESWT DEEHDKFLEA LQLFDRDWKK  60
IEDFVGSKTV IQIRSHAQKY FLKVQKNGTV AHVPPPRPKR KASHPYPQKA SKNVLMPLQG  120
SLAYPSSINN LASGYSPWDE TSMMINASSS QMVPSQDDFT SLHGIEADIA SKGVARISNS  180
IPKQGKQAPV LHGLPDFSEV YGFIGSVFDP EIDGHVQKLK EMDPINFETV LLLMRNLTVN  240
LSSPDFEPIR NVLSSYDVNS KTVGLAAGFV AKKQTSDLSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.11e-127MYB_related family protein