PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023910283.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

bHLH

Protein Properties

Length: 602aa MW: 65104.6 Da PI: 9.4657

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023910283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	58.1	1.5e-18	319	369	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r++h+ +Er+RR+++++ feeL + +P++ +++K sK eiL+kA++YI++ q XP_023910283.1 319 RVSHKLAERKRRSEMKDLFEELNKAVPSS---GGTKASKWEILTKAIDYIRNTQ 369 89*************************...****************9866 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MAAPTSDASS LQHPHQGLPS ISSLTNGLSA SSSQRSPDQQ SLTDSTRDSG TWPGHINSKH 60 NSANSGLQVH TLLNPDDSPL RNSVPSTPLS ANLRNSTASG GSSILPSINQ GFHQDGNRDS 120 YASMESRRSS VDSRMHQGFS NMYINNSNNI PGSPYENGSQ NGSHTSLAQN LRRPGPGGPM 180 SPLSGRSSLR GHPAPRIAPP IAPAGQRGAG ADPTASRPTP GHAWAFPDEA IPEERRGSDS 240 EESSFEHSVS RANSFAASSI RSSIFSNDSQ MPQGQRRFDD GDPQTHHHSM GQHRTIQSLQ 300 NENMSGQGVG NYSRTPELRV SHKLAERKRR SEMKDLFEEL NKAVPSSGGT KASKWEILTK 360 AIDYIRNTQH DARQLHLEVT RLQRDADYTR DSIKENEMLK TEIQVMHQNL RRLDPNAPHV 420 YGHLTSQLQH GSSGGQSNGT SNIALPPLAP TQPPPPVPFN GGPPAPMQGV EYGDAAALVL 480 YGDASHIAQC TNGTWYERCN QLLGVQAKYS SSTSTVAVTQ SRLSFATSLL LDRITVILIL 540 RNRLPAGVES GVKPRFPGLH SDDHDNGQAT SIARSGSELT AQYKRKGLGR LVMKNYDTTR 600 YG

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MAAPTSDASS LQHPHQGLPS ISSLTNGLSA SSSQRSPDQQ SLTDSTRDSG TWPGHINSKH  60
NSANSGLQVH TLLNPDDSPL RNSVPSTPLS ANLRNSTASG GSSILPSINQ GFHQDGNRDS  120
YASMESRRSS VDSRMHQGFS NMYINNSNNI PGSPYENGSQ NGSHTSLAQN LRRPGPGGPM  180
SPLSGRSSLR GHPAPRIAPP IAPAGQRGAG ADPTASRPTP GHAWAFPDEA IPEERRGSDS  240
EESSFEHSVS RANSFAASSI RSSIFSNDSQ MPQGQRRFDD GDPQTHHHSM GQHRTIQSLQ  300
NENMSGQGVG NYSRTPELRV SHKLAERKRR SEMKDLFEEL NKAVPSSGGT KASKWEILTK  360
AIDYIRNTQH DARQLHLEVT RLQRDADYTR DSIKENEMLK TEIQVMHQNL RRLDPNAPHV  420
YGHLTSQLQH GSSGGQSNGT SNIALPPLAP TQPPPPVPFN GGPPAPMQGV EYGDAAALVL  480
YGDASHIAQC TNGTWYERCN QLLGVQAKYS SSTSTVAVTQ SRLSFATSLL LDRITVILIL  540
RNRLPAGVES GVKPRFPGLH SDDHDNGQAT SIARSGSELT AQYKRKGLGR LVMKNYDTTR  600
YG