PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023909538.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 211aa MW: 24420 Da PI: 9.3732 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.3 | 2.2e-51 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++k+++ +l + +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk++ + XP_023909538.1 7 LPPGFRFHPTDEELVNHYLCRKCASMPLAV-PIIREIDLYKYDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGK- 99 79*************************999.88***************7666789*************************************98. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + g+kk Lvfy g+ap+g kt+W+mheyrl XP_023909538.1 100 -PKPLGIKKALVFYAGKAPRGIKTNWIMHEYRL 131 .789***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 211 aa Download sequence |
MSSELELPPG FRFHPTDEEL VNHYLCRKCA SMPLAVPIIR EIDLYKYDPW QLPEMALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPIGKP KPLGIKKALV FYAGKAPRGI 120 KTNWIMHEYR LANVDRSAGK KNNLRLDDWV LCRIYNKKGT LEKYQPLDQK MEKFAEIEEE 180 QKPKIMVSGQ NTTVTQTMIS NDQLHMDTSD S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G08790.1 | 1e-100 | NAC family protein |