PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023909066.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 1018aa    MW: 111263 Da    PI: 4.4144
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023909066.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.72.3e-12873916146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r rW++++ el+++av+q+G++ ++ I + ++ gRt+ q+k+++ k
   XP_023909066.1 873 RTRWSKQDTELFYEAVRQFGTD-FSMIQQLFP-GRTRHQVKLKFKK 916
                      78********************.*********.**********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1018 aa     Download sequence    
MDSFDDILGE PAANRAQAGA KFRPKAKPRP RKETPAVVHP TISSNTKEDT AILPITDVGT  60
LESIRPADVD NKLNNEFGSS IANSAENFTK NNEGSFSGVP NLDDTTKLIL VNPSSQVVAT  120
SEDVVSIDAL PKGVAVTDIN GDWHFSFRQS ETEADFVGLD VDPSADISPE PVTLTSAGSD  180
LKTSVQALDI ADDGLKDPFT LSFSTPEIVG TKVPSNECSI SDDLHSEAAI LDGNGKLHPN  240
NKKLAEEVDS LGLDLDPFED NLHGHVTNKS RGGGKFKPKA EICPRNETST SLPSAPSNAT  300
EEKPVTLSST SLETEQYAQP VAENKLTNED GLSAVTLQIV GTREPSKDNE CSFPDKRSSE  360
SIKSSSQLVT GEDAGSRDAL QSEVAMCDSN SVWHSSIGML SSEVDCMGFE LEPFGDNEGE  420
GSLFHSETST LLASNNKDTE ENFGIPACSS VDSSALKVCD AAEPHTCSDP HMAPDPVTCG  480
EDAFSNQYGD FQIENGRLET EFQEAGTFSG METLDFMSEA NIASGRQTGK FRPKPKMKTG  540
KEKHSTAISH PQSESVLHLQ GPQLVTSETG YMASVPAFSA DCVQDDSMRF GEFIPSDPAS  600
VIMMNEELRN LAETSHSGGP ILGDILHSED VPEIRVEVNA NIGKGAASNL PQKQKQSATA  660
GEENDGGKSS RKLRKRVAFQ LIDEQDDGAN DDFSAEPPTN SSIDEDEDEN NNDEHKVESK  720
SQKKRAPRKS KKPEAENGKP VRKRKKANEA ADQSTEKPPK KFSHSTRRNR RCVDKALLET  780
PEDEIDPQRL PIKDLILLAE HKERLASKEA AALKTPLTNL SSSNSFHEED PYNGEEAFAS  840
EQGRGSDDDE PNYEVPISDR LINYQSYMDK TPRTRWSKQD TELFYEAVRQ FGTDFSMIQQ  900
LFPGRTRHQV KLKFKKEERQ YPFRLSEALA SRSKDHSHFQ LVIERLQQAS QAEEHSNRED  960
SVGLTGEEGV EGLETETNEA AKPEEDEEVV IKDQEADFAE VHSPVKSYAS DDGPDDWI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1723745KKRAPRKSKKPEAENGKPVRKRK
2739745KPVRKRK
3742746RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.17e-53MYB_related family protein