PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023909040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB | ||||||||
Protein Properties | Length: 197aa MW: 22599.1 Da PI: 5.2184 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 61.9 | 1.3e-19 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+++++ +G ++W+tIa + g++R++k+c++rw++yl XP_023909040.1 15 KGAWTAEEDRKLAEVIAIHGAKRWTTIATKAGLNRCGKSCRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 50.8 | 3.8e-16 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l XP_023909040.1 68 RGNISDQEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 78999*****************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MEAINSVSTK KEVNKGAWTA EEDRKLAEVI AIHGAKRWTT IATKAGLNRC GKSCRLRWLN 60 YLRPNIKRGN ISDQEEDLIL RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKLRQE 120 EKQSGAATRD GYTVQENREE DKVNEEMSGE ENTSKGVDDS KSDFDVDEFF DFSNETTLNL 180 EWVSQFLELD QGFSDVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 7e-55 | MYB family protein |