PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023909033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | NF-YC | ||||||||
Protein Properties | Length: 179aa MW: 19589.9 Da PI: 4.907 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 55.5 | 1.3e-17 | 17 | 102 | 18 | 99 |
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaee....nkrrtlkksdiaaavtrtdifdflvdivprd 99 + +lPlar+kki+ ad d++ s++a l++ a e+f+ +l +s++ ++ + rr ++ d+a+av+r + +fl+d+vp+ XP_023909033.1 17 QVSLPLARVKKIIHADSDISNCSTNAAFLITVAAEMFLQHLVEQSYNIVKSertsKPRRNIQYRDVANAVARVENLEFLTDVVPKT 102 789******************************************97654311114599*************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MPYNNTPIAP TQEITGQVSL PLARVKKIIH ADSDISNCST NAAFLITVAA EMFLQHLVEQ 60 SYNIVKSERT SKPRRNIQYR DVANAVARVE NLEFLTDVVP KTITYKQYKE KVAKKEIVES 120 ASQGTLDKHM EGVEPSGNNS VRDGADTGAH TAMEIDDEDG QDTDGDVVIV GSKNRAGEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 4e-18 | NF-YC family protein |