PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908923.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1162aa MW: 128406 Da PI: 9.3606 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.4 | 7.7e-09 | 54 | 86 | 3 | 37 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtl 37 W++eE e+++ a +++G++ Wk++a+ + +R+ XP_023908923.1 54 QWSKEELERFYAAYRKFGKD-WKKVAAAVR-NRST 86 5*****************99.*********.9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1162 aa Download sequence |
MAPSRKSRSV NKRFSYINEV ASSKDGENAN KSRQRGSPGF VQKKRKLSDM LGAQWSKEEL 60 ERFYAAYRKF GKDWKKVAAA VRNRSTDMVE ALYSMNKAYL SLPEGTASVV GLIAMMTDHY 120 CVLGGSDSEQ ESNEGAEASR KPQKRARVKT QNNTSKGLDG NFPDVSRSQS VASSYGCLSL 180 LKKRRSGIKP HAVGKRTPRV PVSYYDKDNA EKYFSPARQG SKQKVDSKDD DVAHEIALVL 240 TEASQRGGSP QLSRTPNRKT KGARPSPVKN GERMHAESET TCTKLRGSQV DEGGCELSLG 300 STEADNGDYA RDKGFLRGRE RAGTVGQQKV KRYHVKKPEV EESINNDVDD IKEACSGTEE 360 GQKPGAVKGK LESEVVRSPF KGQRKRSKKV LFGGDDGSEF DALQTLANLS LMMPDTESSA 420 QVKEESLDKS KLKGNHSIPE AEVSALRTSK LSKGFTHNIG AIPETKEEAH LSNTGIRKRK 480 QKTSPFKIFE KEAHTNSHSE PKKIEATAEV VSVNKGRRSS HNSAQAKQGR VVKPKERTSL 540 STDLRGEGND SALPTVQVTS ADQVNLPTKA RSRRKVDLQK PVIQNDSKSS ESILNDHPSI 600 QILSSHDRVL SLKEKLSNCL SSDQARRWCT FEWFYSAIDY PWFAKREFME YLDHVGLGLV 660 PRLTRVEWGV IRSSLGRPRR FSQQFLKEER EKLNQYRESV RGHYAELRAG TREGLPTDLA 720 RPLSVGQRVI ALHPRTREIH NGSVLTVDHC RCRIQFDQPE LGVEFVLDID CMPFNPLENM 780 PASLTRHNAS VNKLFENFNE LKIKFAPSEN LESTDGPYIS PSSHHISNLL KQGGSPSSSL 840 QAKIRPTDIA NTQQAANSQP SLLAQIQAKE ADVQALSELT LTLDKKEAVL TELRCMNDAV 900 FDNQKDGDNS LKESESFKKQ YAAVLLQLNE VNEQVSSALF CLRQRNTYQE SSPHLLLKSM 960 ANLGDPGGQL SSLDCSAGHA QESGSHVSEI VESSRKRAKT MVDVAMQAVS SFKKGGVNME 1020 RIEEAMDFVN NQLSVDDSSM LVGRASAPTD ANHVTLASQD QSTACSSVSS ATNNAPDPNL 1080 DRLANQNEVK IPSELIVHCV ATLLMIQKCT ERQFPPAVVA QVLDSAVKSL QPCCSQNLPI 1140 YAEIQKCMGI IRNQILALVP TT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |