PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908923.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 1162aa    MW: 128406 Da    PI: 9.3606
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.7e-095486337
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                      W++eE e+++ a +++G++ Wk++a+ +  +R+ 
   XP_023908923.1 54 QWSKEELERFYAAYRKFGKD-WKKVAAAVR-NRST 86
                     5*****************99.*********.9996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1162 aa     Download sequence    
MAPSRKSRSV NKRFSYINEV ASSKDGENAN KSRQRGSPGF VQKKRKLSDM LGAQWSKEEL  60
ERFYAAYRKF GKDWKKVAAA VRNRSTDMVE ALYSMNKAYL SLPEGTASVV GLIAMMTDHY  120
CVLGGSDSEQ ESNEGAEASR KPQKRARVKT QNNTSKGLDG NFPDVSRSQS VASSYGCLSL  180
LKKRRSGIKP HAVGKRTPRV PVSYYDKDNA EKYFSPARQG SKQKVDSKDD DVAHEIALVL  240
TEASQRGGSP QLSRTPNRKT KGARPSPVKN GERMHAESET TCTKLRGSQV DEGGCELSLG  300
STEADNGDYA RDKGFLRGRE RAGTVGQQKV KRYHVKKPEV EESINNDVDD IKEACSGTEE  360
GQKPGAVKGK LESEVVRSPF KGQRKRSKKV LFGGDDGSEF DALQTLANLS LMMPDTESSA  420
QVKEESLDKS KLKGNHSIPE AEVSALRTSK LSKGFTHNIG AIPETKEEAH LSNTGIRKRK  480
QKTSPFKIFE KEAHTNSHSE PKKIEATAEV VSVNKGRRSS HNSAQAKQGR VVKPKERTSL  540
STDLRGEGND SALPTVQVTS ADQVNLPTKA RSRRKVDLQK PVIQNDSKSS ESILNDHPSI  600
QILSSHDRVL SLKEKLSNCL SSDQARRWCT FEWFYSAIDY PWFAKREFME YLDHVGLGLV  660
PRLTRVEWGV IRSSLGRPRR FSQQFLKEER EKLNQYRESV RGHYAELRAG TREGLPTDLA  720
RPLSVGQRVI ALHPRTREIH NGSVLTVDHC RCRIQFDQPE LGVEFVLDID CMPFNPLENM  780
PASLTRHNAS VNKLFENFNE LKIKFAPSEN LESTDGPYIS PSSHHISNLL KQGGSPSSSL  840
QAKIRPTDIA NTQQAANSQP SLLAQIQAKE ADVQALSELT LTLDKKEAVL TELRCMNDAV  900
FDNQKDGDNS LKESESFKKQ YAAVLLQLNE VNEQVSSALF CLRQRNTYQE SSPHLLLKSM  960
ANLGDPGGQL SSLDCSAGHA QESGSHVSEI VESSRKRAKT MVDVAMQAVS SFKKGGVNME  1020
RIEEAMDFVN NQLSVDDSSM LVGRASAPTD ANHVTLASQD QSTACSSVSS ATNNAPDPNL  1080
DRLANQNEVK IPSELIVHCV ATLLMIQKCT ERQFPPAVVA QVLDSAVKSL QPCCSQNLPI  1140
YAEIQKCMGI IRNQILALVP TT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.20.0MYB_related family protein