PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908920.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | MYB_related | ||||||||
Protein Properties | Length: 1164aa MW: 128647 Da PI: 9.3606 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.4 | 7.7e-09 | 54 | 86 | 3 | 37 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtl 37 W++eE e+++ a +++G++ Wk++a+ + +R+ XP_023908920.1 54 QWSKEELERFYAAYRKFGKD-WKKVAAAVR-NRST 86 5*****************99.*********.9996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1164 aa Download sequence |
MAPSRKSRSV NKRFSYINEV ASSKDGENAN KSRQRGSPGF VQKKRKLSDM LGAQWSKEEL 60 ERFYAAYRKF GKDWKKVAAA VRNRSTDMVE ALYSMNKAYL SLPEGTASVV GLIAMMTDHY 120 CVLGGSDSEQ ESNEGAEASR KPQKRARVKT QNNTSKGLDG NFPDVSRSQS VASSYGCLSL 180 LKKRRSGIKP HAVGKRTPRV PVSYYDKDNA EKYFSPARQG SKQKVDSKDD DVAHEIALVL 240 TEASQRGGSP QLSRTPNRKT KGARPSPVKN GERMHAESET TCTKLRGSQV DEGGCELSLG 300 STEADNGDYA RDKGFLRGRE RAGTVGQQKV KRYHVKKPEV EESINNDVDD IKEACSGTEE 360 GQKPGAVKGK LESEVVRSPF KGQRKRSKKV LFGGDDGSEF DALQTLANLS LMMPDTESSA 420 QVKEESLDKS KLKGNHSIPE AEVSALRTSK LSKGFTHNIG AIPETKEEAH LSNTGIRKRK 480 QKTSPFKLQI FEKEAHTNSH SEPKKIEATA EVVSVNKGRR SSHNSAQAKQ GRVVKPKERT 540 SLSTDLRGEG NDSALPTVQV TSADQVNLPT KARSRRKVDL QKPVIQNDSK SSESILNDHP 600 SIQILSSHDR VLSLKEKLSN CLSSDQARRW CTFEWFYSAI DYPWFAKREF MEYLDHVGLG 660 LVPRLTRVEW GVIRSSLGRP RRFSQQFLKE EREKLNQYRE SVRGHYAELR AGTREGLPTD 720 LARPLSVGQR VIALHPRTRE IHNGSVLTVD HCRCRIQFDQ PELGVEFVLD IDCMPFNPLE 780 NMPASLTRHN ASVNKLFENF NELKIKFAPS ENLESTDGPY ISPSSHHISN LLKQGGSPSS 840 SLQAKIRPTD IANTQQAANS QPSLLAQIQA KEADVQALSE LTLTLDKKEA VLTELRCMND 900 AVFDNQKDGD NSLKESESFK KQYAAVLLQL NEVNEQVSSA LFCLRQRNTY QESSPHLLLK 960 SMANLGDPGG QLSSLDCSAG HAQESGSHVS EIVESSRKRA KTMVDVAMQA VSSFKKGGVN 1020 MERIEEAMDF VNNQLSVDDS SMLVGRASAP TDANHVTLAS QDQSTACSSV SSATNNAPDP 1080 NLDRLANQNE VKIPSELIVH CVATLLMIQK CTERQFPPAV VAQVLDSAVK SLQPCCSQNL 1140 PIYAEIQKCM GIIRNQILAL VPTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |