PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908920.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family MYB_related
Protein Properties Length: 1164aa    MW: 128647 Da    PI: 9.3606
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908920.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.47.7e-095486337
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-H CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtl 37
                      W++eE e+++ a +++G++ Wk++a+ +  +R+ 
   XP_023908920.1 54 QWSKEELERFYAAYRKFGKD-WKKVAAAVR-NRST 86
                     5*****************99.*********.9996 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1164 aa     Download sequence    
MAPSRKSRSV NKRFSYINEV ASSKDGENAN KSRQRGSPGF VQKKRKLSDM LGAQWSKEEL  60
ERFYAAYRKF GKDWKKVAAA VRNRSTDMVE ALYSMNKAYL SLPEGTASVV GLIAMMTDHY  120
CVLGGSDSEQ ESNEGAEASR KPQKRARVKT QNNTSKGLDG NFPDVSRSQS VASSYGCLSL  180
LKKRRSGIKP HAVGKRTPRV PVSYYDKDNA EKYFSPARQG SKQKVDSKDD DVAHEIALVL  240
TEASQRGGSP QLSRTPNRKT KGARPSPVKN GERMHAESET TCTKLRGSQV DEGGCELSLG  300
STEADNGDYA RDKGFLRGRE RAGTVGQQKV KRYHVKKPEV EESINNDVDD IKEACSGTEE  360
GQKPGAVKGK LESEVVRSPF KGQRKRSKKV LFGGDDGSEF DALQTLANLS LMMPDTESSA  420
QVKEESLDKS KLKGNHSIPE AEVSALRTSK LSKGFTHNIG AIPETKEEAH LSNTGIRKRK  480
QKTSPFKLQI FEKEAHTNSH SEPKKIEATA EVVSVNKGRR SSHNSAQAKQ GRVVKPKERT  540
SLSTDLRGEG NDSALPTVQV TSADQVNLPT KARSRRKVDL QKPVIQNDSK SSESILNDHP  600
SIQILSSHDR VLSLKEKLSN CLSSDQARRW CTFEWFYSAI DYPWFAKREF MEYLDHVGLG  660
LVPRLTRVEW GVIRSSLGRP RRFSQQFLKE EREKLNQYRE SVRGHYAELR AGTREGLPTD  720
LARPLSVGQR VIALHPRTRE IHNGSVLTVD HCRCRIQFDQ PELGVEFVLD IDCMPFNPLE  780
NMPASLTRHN ASVNKLFENF NELKIKFAPS ENLESTDGPY ISPSSHHISN LLKQGGSPSS  840
SLQAKIRPTD IANTQQAANS QPSLLAQIQA KEADVQALSE LTLTLDKKEA VLTELRCMND  900
AVFDNQKDGD NSLKESESFK KQYAAVLLQL NEVNEQVSSA LFCLRQRNTY QESSPHLLLK  960
SMANLGDPGG QLSSLDCSAG HAQESGSHVS EIVESSRKRA KTMVDVAMQA VSSFKKGGVN  1020
MERIEEAMDF VNNQLSVDDS SMLVGRASAP TDANHVTLAS QDQSTACSSV SSATNNAPDP  1080
NLDRLANQNE VKIPSELIVH CVATLLMIQK CTERQFPPAV VAQVLDSAVK SLQPCCSQNL  1140
PIYAEIQKCM GIIRNQILAL VPTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.20.0MYB_related family protein