PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908918.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 358aa    MW: 39142.8 Da    PI: 4.8676
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91.1e-1752100355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  XP_023908918.1  52 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 100
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MSTSKTLDKP FQGYEAASSQ VQNGFALIQR NTSPSQPGER RGRRKQAEPG RFLGVRRRPW  60
GRYAAEIRDP TTKERHWLGT FDTAQEAALA YDRAALSMKG TQARTNFIYS DNTTFHSLLT  120
SFDVQAVVPT SSQFLTTSTA TTHTKQPTNI HQSSTPSKLN NCTHSESETS TQLNNNTWAD  180
TETSYGVGVA DDNSFFFSNE SNSGYLGCIV PDNCLRPSSN PTSTNSKYSN FTTSNDSVNT  240
NSIEIQSHCD SHTLPFDLVN VPAAAATASN YPGDFSCLDE LNHGFWDIQQ SWESNSSELS  300
AMINNPLMVE DGCMGALYPI IDNPSYGLIM PQAVASSTTS SPSVSPYSDV VDLGYSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-59ERF family protein