PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908828.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 188aa    MW: 21823.9 Da    PI: 9.4613
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-142732299
                    H.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3 22 faeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                    f++++g++   s    le ++  +W+v+l  + + ++++l+kGWkeF+k   Lk+g fvvF+++g+s f   v +f++
  XP_023908828.1  2 FIRKYGEN--LSSPTFLELPNDAKWKVEL--TECNDEVWLQKGWKEFAKCYSLKQGHFVVFRYEGNSHF--QVLIFDE 73
                    66677655..444577888999*******..**********************************9999..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MFIRKYGENL SSPTFLELPN DAKWKVELTE CNDEVWLQKG WKEFAKCYSL KQGHFVVFRY  60
EGNSHFQVLI FDETATKIDY HSNSSHGHED GKFDEKYEVP NMEDDESDSS VLTVLPCRGR  120
PHMKMKSTYT SARIVSQKSN VRIRIQKLTR KDKAKALKKV ASAFKLKNPY FMVVMQPSFV  180
QAYGSVSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-21B3 family protein