PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908504.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 271aa MW: 30852.7 Da PI: 6.9519 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.5 | 4.5e-20 | 95 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 y+G+r+++ +g+W+AeIrdp + r++lg+f taeeAa a+++a+ +++g XP_023908504.1 95 VYRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAALAYDQAAMRIRG 144 69*******.**********94....35************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MCGGAIISDF VDIKPRGRRT TTEDLWSELD TASDLFGFNS NSALDDFPNS FFHLKAPQKP 60 KQLEKVRSEK RSDTDEKAKQ VAKKEKKRER TRKNVYRGIR QRPWGKWAAE IRDPQKGVRV 120 WLGTFNTAEE AALAYDQAAM RIRGDKAKLN FAHHRHQPPP PSTPEPPPPA AKKRCIFPES 180 SETSFETTES PPVLLQPLIQ NEICCKNEVA QFDHGFELKD QISSLESFLG LEHEPEPSLV 240 SGSGSESMES VDLWMLDDLV THHQQQRQLL Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 4e-45 | ERF family protein |