PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908481.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ERF | ||||||||
Protein Properties | Length: 176aa MW: 19070.1 Da PI: 9.0824 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.5 | 3.8e-19 | 61 | 112 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g+++AeIrd ++ +r++lg+f taeeAa a+++a+ k++g+ XP_023908481.1 61 HYRGVRRRP-WGKYAAEIRD----SaRHgARIWLGTFTTAEEAALAYDKAAFKMRGA 112 8********.**********....33236**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MVLASQNELP FNENDSQDMT LYQVLNEANQ AMALNTSFVP QRHQISSSSS LEPARNIGKK 60 HYRGVRRRPW GKYAAEIRDS ARHGARIWLG TFTTAEEAAL AYDKAAFKMR GAKALLNFPA 120 EVVAASSVQR FNPNSSMVSS TRHDSESSGS SSTHSVGNSR LESESSCSTA GEAGGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23240.1 | 5e-31 | ERF family protein |