PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023908479.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family ERF
Protein Properties Length: 264aa    MW: 29530 Da    PI: 4.6123
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023908479.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19120171256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd    + k +r++lg+f taeeAa a+++a+++++g+
  XP_023908479.1 120 HYRGVRRRP-WGKYAAEIRDsT--R-KGARVWLGTFNTAEEAALAYDKAALRIRGH 171
                     7********.**********32..2.24**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MAENGEDYAA SGAMLENVWA SFIGGDGAGE GTKDTSEIPN SWDELPSLDG RHRSMEVLQR  60
LPSLGRWISM GAEAWEELLD GIIPASNMQQ SCNDKLESNS ATDSCLLETN VRVEKVATRH  120
YRGVRRRPWG KYAAEIRDST RKGARVWLGT FNTAEEAALA YDKAALRIRG HKAYLNFPLE  180
TVDKALGIDV NNSSITSHLD EKETFLGCSE KVYNPRKRVL KEWEQDVDMM IEQPALKRMA  240
GNEFDVVEFQ DLGSDFLDSL LSSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.12e-39ERF family protein