PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023908459.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 377aa MW: 41521.2 Da PI: 7.1779

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023908459.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.9	7.4e-18	55	115	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k+ XP_023908459.1 55 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSKH 115 89***************99***********************************995 PP
2	Wus_type_Homeobox	112.2	2.7e-36	54	116	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R+++k XP_023908459.1 54 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHK 116 689**********************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MASSNRHWPS MFKSKPCNTQ HQWQHDINSS LMSNGCHRTP YNSVPGCEER SPEPKPRWNP 60 KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL 120 QNSKNQSQQA QNNPPITSLA PSATTAPSSS SSSSEKSSPK APLYNTYSMG FPNVTDVSNS 180 PTASVNQTYF QSHSEVLPEP FFFPVQQPGG SVHHISEGTS SFTQGFCFSE LSNVVQVPEH 240 TVGPCTSLLL SEMMNDGGSK KDQEEKIVKI NPQLNYTLTT HPTTVSPSTT TTGISVPSSI 300 NQNQGVGELG AVGVVGPEKS TVFINDVAFE VAAGPFNVRE AFGDEAVLIH FSGQPVLTNE 360 WGVTLQPLQH GAFYYLI

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MASSNRHWPS MFKSKPCNTQ HQWQHDINSS LMSNGCHRTP YNSVPGCEER SPEPKPRWNP  60
KPEQIRILEA IFNSGMVNPP RDEIRKIRAQ LQEYGQVGDA NVFYWFQNRK SRSKHKLRHL  120
QNSKNQSQQA QNNPPITSLA PSATTAPSSS SSSSEKSSPK APLYNTYSMG FPNVTDVSNS  180
PTASVNQTYF QSHSEVLPEP FFFPVQQPGG SVHHISEGTS SFTQGFCFSE LSNVVQVPEH  240
TVGPCTSLLL SEMMNDGGSK KDQEEKIVKI NPQLNYTLTT HPTTVSPSTT TTGISVPSSI  300
NQNQGVGELG AVGVVGPEKS TVFINDVAFE VAAGPFNVRE AFGDEAVLIH FSGQPVLTNE  360
WGVTLQPLQH GAFYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	5e-64	WOX family protein