PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908185.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | ARR-B | ||||||||
Protein Properties | Length: 707aa MW: 76974.8 Da PI: 5.4168 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91 | 1.1e-28 | 213 | 266 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G ekA+Pk+il+lm+v+gLt+e+v+SHLQkYRl XP_023908185.1 213 KPRVVWSVELHRKFVAAVNQL-GLEKAVPKKILDLMDVEGLTRENVASHLQKYRL 266 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 39.1 | 1.8e-12 | 215 | 265 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I m +g+t++++ s++qky+ XP_023908185.1 215 RVVWSVELHRKFVAAVNQLGLEkaVPKKILDLMDvEGLTRENVASHLQKYR 265 678***********************************************7 PP | |||||||
3 | Response_reg | 86.2 | 9.4e-29 | 27 | 135 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ ++ll+++l+k +y +v++a ++ ale+l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++ah++ +++ + + G XP_023908185.1 27 VLAVDDDPICLKLLETLLRKCQY-QVTTANQAVIALEMLRENRdkFDLVISDVNMPDMDGFKLLELVGL-EMDLPVIMLSAHSDTKLVMKGITHG 119 799********************.***************999889*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_023908185.1 120 AVDYLLKPVRIEELKN 135 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 707 aa Download sequence |
MTVEDQRGGV VSKDVSHYDK FPVGMRVLAV DDDPICLKLL ETLLRKCQYQ VTTANQAVIA 60 LEMLRENRDK FDLVISDVNM PDMDGFKLLE LVGLEMDLPV IMLSAHSDTK LVMKGITHGA 120 VDYLLKPVRI EELKNIWQHV IRRKKIDPKD QNKSPNEDKA RHGNSESGQG ASSLGNADQN 180 GKNSRKRKDQ NEDEEEEGDE NGNDSEDPSS QKKPRVVWSV ELHRKFVAAV NQLGLEKAVP 240 KKILDLMDVE GLTRENVASH LQKYRLYLKR ISSVATQQAN MVAALGGKDS SYLRMASLDG 300 FGEFRNLAGS GRLSGSTLSS YAPSGMFGRL NSPAGLNLRG ITSSGLIQPS SQNLSSSINT 360 FGKLQPTLLP SNQSAGLYQG IPTSLELNQL QQSKCATGIG DFDPIKDSTG FTVSGSFPDN 420 RVTVGSSSSL LSRASSNPLM LQGNSQQTHN RGPFGNQSSL GVASLNPESF DLSIGGSSNF 480 VNHNRSDESW QGAVQLSRFS SNALPLSEPF NHDQMASNNL GISSTSPHIG NSPIEFPSTN 540 VVSGRLEDSG DVCQEGLIGN VVHNMTYTSK QRWEEYKQDY NPNMNHSFSD INSMVSNNGI 600 VSPLGRSLDQ NSAICGRSFD VSLIGQLNGG SLSNAQHSEF ENSAVDAKIK SNEDCLLGQT 660 KSQDGFIQNG YESLDDIMNA MMKREQNQTV LSDGEFGINA YSLGSCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-130 | ARR-B family protein |