PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023908037.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | C2H2 | ||||||||
Protein Properties | Length: 145aa MW: 16648.3 Da PI: 10.2615 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19.6 | 2.5e-06 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023908037.1 66 FVCEICNKGFQRDQNLQLHWRGH 88 89*******************88 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MVELENSSPM AVSTASGEDG ISSSRCQTQN PPIPPLKKKQ NLPGMPDPDA EVIALSPKTL 60 MATNRFVCEI CNKGFQRDQN LQLHWRGHNL PWKLRQRTSK EIRKRVYVCP EPSCVRHNPS 120 TALGDLTRIK KHFCRKHHFF FWILT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 2e-60 | C2H2 family protein |