PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907691.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 719aa    MW: 81663.8 Da    PI: 8.5044
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.32.2e-1648128690
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     +  +  + + l++p+kf++++g +   s   tl d+sgr W v+l  rk +++ ++ +GW eFvk + + +g  ++F+++g+s+f
  XP_023907691.1  48 MDVSIIQDKKLRVPNKFVRKFGDE--LSSVATLSDPSGRDWLVEL--RKADQKLWFHDGWHEFVKHHCIHAGNLLIFRYEGNSNF 128
                     55666677889**********865..7779***************..*********************************99988 PP
2B3345e-113614421094
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefelvv 94 
                     v+++++l+lp  f++++g +       t++ ++gr+W++ l   k  +++++++GW +F + + +   g +++Fk++g+s+f+ ++
  XP_023907691.1 361 VFNEKILRLPEIFLQKFGDQ--LASIATVNGPNGRVWQLSL--GKDENGTWFSDGWDKFLDYHSISsNGHIIIFKYEGNSTFNVLF 442
                     678899**********9877..44589999***********..99999*****************989**********99997665 PP
3B350.53.7e-16618713199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffk+ ++ ++  ++ +++p  fa ++  +  e   + l+d++g+++  ++  r +sg+   ++kGW  F+++++L+egD++vF+l++r++  l v
  XP_023907691.1 618 FFKAILRRHNIYNSFVYVPAGFAMKYL-P-SE--SIALQDSDGKRFPARCFDREGSGAgRSIGKGWATFAREHDLEEGDVLVFELINRETIVLEV 708
                     89999999***************9994.3.23..5***************55555555799*************************999999*** PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++fr+
  XP_023907691.1 709 HIFRA 713
                     **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MMINDHGLAL PVTETEQSQS TMAQLVNQSL HSSSPCPNRR ACLFYKLMDV SIIQDKKLRV  60
PNKFVRKFGD ELSSVATLSD PSGRDWLVEL RKADQKLWFH DGWHEFVKHH CIHAGNLLIF  120
RYEGNSNFDI YMFNLTACES CNIPSCSEEP NHVKQCPVSL GKVADNASIE ILGAEEPSHG  180
KHHPVLHGKE VEDDDSIEFL GSFPPRPTSM PRRNNVSDEH VDQQKLYKSC IRTALKNLMH  240
SPDGDNIHLA KDADTLKAKV QSTREIGIQF NESELTRTAG EVGSGYWDEA RQSAKRRKQK  300
FNVEVGMPGA RVSIAVAEKR GRAIRAVLRP RTRRRGVEPA DKRERRCKYP TRDPETFFKI  360
VFNEKILRLP EIFLQKFGDQ LASIATVNGP NGRVWQLSLG KDENGTWFSD GWDKFLDYHS  420
ISSNGHIIIF KYEGNSTFNV LFMFDMTAGK IDYPIDNLSS DAEPDSVPNE EEEKDFGYND  480
VSVSTTYSPS QNSSETWTSD EYFSQGVLKK RNKYTTWTDR KKRHIRKGAS SSGQAATQSC  540
DKCGHHKESE FAKFDKEEAE KTPKEGRFYS SGKRNPKSKY KVDDFSATSG FSKFSKTIQA  600
AKKRARKAAD MFRSEHPFFK AILRRHNIYN SFVYVPAGFA MKYLPSESIA LQDSDGKRFP  660
ARCFDREGSG AGRSIGKGWA TFAREHDLEE GDVLVFELIN RETIVLEVHI FRAIDYSGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1508527LKKRNKYTTWTDRKKRHIRK
2509522KKRNKYTTWTDRKK
3509523KKRNKYTTWTDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-32B3 family protein