PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023907689.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family B3
Protein Properties Length: 724aa    MW: 82180.3 Da    PI: 8.1771
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023907689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.22.2e-1648128690
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     +  +  + + l++p+kf++++g +   s   tl d+sgr W v+l  rk +++ ++ +GW eFvk + + +g  ++F+++g+s+f
  XP_023907689.1  48 MDVSIIQDKKLRVPNKFVRKFGDE--LSSVATLSDPSGRDWLVEL--RKADQKLWFHDGWHEFVKHHCIHAGNLLIFRYEGNSNF 128
                     55666677889**********865..7779***************..*********************************99988 PP
2B3345.1e-113664471094
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EE CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLk.egDfvvFkldgrsefelvv 94 
                     v+++++l+lp  f++++g +       t++ ++gr+W++ l   k  +++++++GW +F + + +   g +++Fk++g+s+f+ ++
  XP_023907689.1 366 VFNEKILRLPEIFLQKFGDQ--LASIATVNGPNGRVWQLSL--GKDENGTWFSDGWDKFLDYHSISsNGHIIIFKYEGNSTFNVLF 447
                     678899**********9877..44589999***********..99999*****************989**********99997665 PP
3B350.53.8e-16623718199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffk+ ++ ++  ++ +++p  fa ++  +  e   + l+d++g+++  ++  r +sg+   ++kGW  F+++++L+egD++vF+l++r++  l v
  XP_023907689.1 623 FFKAILRRHNIYNSFVYVPAGFAMKYL-P-SE--SIALQDSDGKRFPARCFDREGSGAgRSIGKGWATFAREHDLEEGDVLVFELINRETIVLEV 713
                     89999999***************9994.3.23..5***************55555555799*************************999999*** PP

                     EEE-S CS
              B3  95 kvfrk 99 
                     ++fr+
  XP_023907689.1 714 HIFRA 718
                     **996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 724 aa     Download sequence    
MMINDHGLAL PVTETEQSQS TMAQLVNQSL HSSSPCPNRR ACLFYKLMDV SIIQDKKLRV  60
PNKFVRKFGD ELSSVATLSD PSGRDWLVEL RKADQKLWFH DGWHEFVKHH CIHAGNLLIF  120
RYEGNSNFDI YMFNLTACES CNIPSCSEEP NHVKQCPVSL GKVADNASIE ILGAEEPSHG  180
KHHPVLHGKE VEDDDSIEFL GSFPPRPTSM PRRNNVSDEH VDQQKLYKSC IRTALKNLMH  240
SPDGDNIHLA KDADTLKAKV QSTREIGIQF NESELTRTAG EVGSGYWDEA RQSAKRRKQS  300
TEPTEFNVEV GMPGARVSIA VAEKRGRAIR AVLRPRTRRR GVEPADKRER RCKYPTRDPE  360
TFFKIVFNEK ILRLPEIFLQ KFGDQLASIA TVNGPNGRVW QLSLGKDENG TWFSDGWDKF  420
LDYHSISSNG HIIIFKYEGN STFNVLFMFD MTAGKIDYPI DNLSSDAEPD SVPNEEEEKD  480
FGYNDVSVST TYSPSQNSSE TWTSDEYFSQ GVLKKRNKYT TWTDRKKRHI RKGASSSGQA  540
ATQSCDKCGH HKESEFAKFD KEEAEKTPKE GRFYSSGKRN PKSKYKVDDF SATSGFSKFS  600
KTIQAAKKRA RKAADMFRSE HPFFKAILRR HNIYNSFVYV PAGFAMKYLP SESIALQDSD  660
GKRFPARCFD REGSGAGRSI GKGWATFARE HDLEEGDVLV FELINRETIV LEVHIFRAID  720
YSGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1513532LKKRNKYTTWTDRKKRHIRK
2514527KKRNKYTTWTDRKK
3514528KKRNKYTTWTDRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-32B3 family protein